Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.04■□□□□ 0.32
PRRX1P54821 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.04■□□□□ 0.32
PRRX1P54821 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PRRX1P54821 KRT18P11-201ENST00000435214 1283 ntBASIC17.04■□□□□ 0.32
PRRX1P54821 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.04■□□□□ 0.32
PRRX1P54821 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.04■□□□□ 0.32
PRRX1P54821 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 AC026310.3-201ENST00000625186 2373 ntBASIC17.04■□□□□ 0.32
PRRX1P54821 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.04■□□□□ 0.32
PRRX1P54821 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PRRX1P54821 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PRRX1P54821 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PRRX1P54821 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PRRX1P54821 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRRX1P54821 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.03■□□□□ 0.32
PRRX1P54821 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
PRRX1P54821 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PRRX1P54821 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PRRX1P54821 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.03■□□□□ 0.32
PRRX1P54821 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.03■□□□□ 0.32
PRRX1P54821 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.03■□□□□ 0.32
PRRX1P54821 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.03■□□□□ 0.32
PRRX1P54821 AC137761.2-201ENST00000561729 223 ntBASIC17.03■□□□□ 0.32
PRRX1P54821 AC145350.3-201ENST00000569033 163 ntBASIC17.03■□□□□ 0.32
PRRX1P54821 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.03■□□□□ 0.32
PRRX1P54821 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PRRX1P54821 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PRRX1P54821 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.02■□□□□ 0.32
PRRX1P54821 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 FEM1AP4-201ENST00000443167 1987 ntBASIC17.02■□□□□ 0.32
PRRX1P54821 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PRRX1P54821 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRRX1P54821 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.02■□□□□ 0.32
PRRX1P54821 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.02■□□□□ 0.32
PRRX1P54821 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PRRX1P54821 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.02■□□□□ 0.32
PRRX1P54821 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.02■□□□□ 0.32
PRRX1P54821 AC016769.1-201ENST00000409132 1010 ntBASIC17.02■□□□□ 0.32
PRRX1P54821 AC245052.3-201ENST00000450182 901 ntBASIC17.02■□□□□ 0.32
PRRX1P54821 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.02■□□□□ 0.32
PRRX1P54821 SLC7A5P2-201ENST00000553010 536 ntBASIC17.02■□□□□ 0.32
PRRX1P54821 SLC7A5P1-201ENST00000568957 537 ntBASIC17.02■□□□□ 0.32
PRRX1P54821 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.02■□□□□ 0.32
PRRX1P54821 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PRRX1P54821 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRRX1P54821 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRRX1P54821 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PRRX1P54821 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PRRX1P54821 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PRRX1P54821 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.01■□□□□ 0.31
PRRX1P54821 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.01■□□□□ 0.31
PRRX1P54821 AL162430.1-201ENST00000480705 870 ntBASIC17.01■□□□□ 0.31
PRRX1P54821 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.01■□□□□ 0.31
PRRX1P54821 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.01■□□□□ 0.31
PRRX1P54821 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.01■□□□□ 0.31
PRRX1P54821 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.01■□□□□ 0.31
PRRX1P54821 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.01■□□□□ 0.31
PRRX1P54821 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PRRX1P54821 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17■□□□□ 0.31
PRRX1P54821 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PRRX1P54821 DBI-210ENST00000542275 757 ntTSL 5 BASIC17■□□□□ 0.31
PRRX1P54821 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17■□□□□ 0.31
PRRX1P54821 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PRRX1P54821 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17■□□□□ 0.31
PRRX1P54821 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PRRX1P54821 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17■□□□□ 0.31
PRRX1P54821 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PRRX1P54821 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17■□□□□ 0.31
PRRX1P54821 AL049796.1-201ENST00000565336 1766 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms