Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 END3YNL084C 1050 nt2.13□□□□□ -2.07
SSU72P53538 PAU20YOL161C 363 nt2.13□□□□□ -2.07
SSU72P53538 GCY1YOR120W 939 nt2.13□□□□□ -2.07
SSU72P53538 HUA2YOR284W 732 nt2.13□□□□□ -2.07
SSU72P53538 YBR090CYBR090C 369 nt2.13□□□□□ -2.07
SSU72P53538 snR35snR35 204 nt2.13□□□□□ -2.07
SSU72P53538 Q0255Q0255 1419 nt2.13□□□□□ -2.07
SSU72P53538 AEP1YMR064W 1557 nt2.13□□□□□ -2.07
SSU72P53538 USO1YDL058W 5373 nt2.13□□□□□ -2.07
SSU72P53538 MTM1YGR257C 1101 nt2.12□□□□□ -2.07
SSU72P53538 IKI1YHR187W 930 nt2.12□□□□□ -2.07
SSU72P53538 YKL070WYKL070W 510 nt2.12□□□□□ -2.07
SSU72P53538 SMD2YLR275W 333 nt2.12□□□□□ -2.07
SSU72P53538 PRM6YML047C 1059 nt2.12□□□□□ -2.07
SSU72P53538 YBL068W-AYBL068W-A 237 nt2.12□□□□□ -2.07
SSU72P53538 MER1YNL210W 813 nt2.12□□□□□ -2.07
SSU72P53538 MGE1YOR232W 687 nt2.12□□□□□ -2.07
SSU72P53538 MUB1YMR100W 1863 nt2.11□□□□□ -2.07
SSU72P53538 NGG1YDR176W 2109 nt2.11□□□□□ -2.07
SSU72P53538 CST9YLR394W 1449 nt2.11□□□□□ -2.07
SSU72P53538 BIT61YJL058C 1632 nt2.11□□□□□ -2.07
SSU72P53538 SRP1YNL189W 1629 nt2.11□□□□□ -2.07
SSU72P53538 HOS4YIL112W 3252 nt2.11□□□□□ -2.07
SSU72P53538 YFL015CYFL015C 495 nt2.11□□□□□ -2.07
SSU72P53538 GTR2YGR163W 1026 nt2.11□□□□□ -2.07
SSU72P53538 VMA10YHR039C-A 345 nt2.11□□□□□ -2.07
SSU72P53538 RPC25YKL144C 639 nt2.11□□□□□ -2.07
SSU72P53538 SPR2YOR214C 711 nt2.11□□□□□ -2.07
SSU72P53538 NOP56YLR197W 1515 nt2.11□□□□□ -2.07
SSU72P53538 NUP100YKL068W 2880 nt2.11□□□□□ -2.07
SSU72P53538 INP51YIL002C 2841 nt2.1□□□□□ -2.07
SSU72P53538 YDR061WYDR061W 1620 nt2.1□□□□□ -2.07
SSU72P53538 HAA1YPR008W 2085 nt2.1□□□□□ -2.07
SSU72P53538 SEC16YPL085W 6588 nt2.1□□□□□ -2.07
SSU72P53538 MST27YGL051W 705 nt2.1□□□□□ -2.07
SSU72P53538 TWF1YGR080W 999 nt2.1□□□□□ -2.07
SSU72P53538 PEX4YGR133W 552 nt2.1□□□□□ -2.07
SSU72P53538 GOS1YHL031C 672 nt2.1□□□□□ -2.07
SSU72P53538 YHR212CYHR212C 336 nt2.1□□□□□ -2.07
SSU72P53538 YIR036W-AYIR036W-A 402 nt2.1□□□□□ -2.07
SSU72P53538 YAL026C-AYAL026C-A 438 nt2.1□□□□□ -2.07
SSU72P53538 YKL066WYKL066W 444 nt2.1□□□□□ -2.07
SSU72P53538 SRL3YKR091W 741 nt2.1□□□□□ -2.07
SSU72P53538 ATG10YLL042C 504 nt2.1□□□□□ -2.07
SSU72P53538 MST28YAR033W 705 nt2.1□□□□□ -2.07
SSU72P53538 YAR060CYAR060C 336 nt2.1□□□□□ -2.07
SSU72P53538 RPL36AYMR194W 303 nt2.1□□□□□ -2.07
SSU72P53538 PDR17YNL264C 1053 nt2.1□□□□□ -2.07
SSU72P53538 CAT5YOR125C 702 nt2.1□□□□□ -2.07
SSU72P53538 SLM4YBR077C 489 nt2.1□□□□□ -2.07
SSU72P53538 TFB1YDR311W 1929 nt2.1□□□□□ -2.07
SSU72P53538 MCD1YDL003W 1701 nt2.1□□□□□ -2.07
SSU72P53538 VPS64YDR200C 1815 nt2.1□□□□□ -2.07
SSU72P53538 DBF20YPR111W 1695 nt2.09□□□□□ -2.07
SSU72P53538 PTP3YER075C 2787 nt2.09□□□□□ -2.07
SSU72P53538 YIL141WYIL141W 390 nt2.09□□□□□ -2.07
SSU72P53538 COA4YLR218C 453 nt2.09□□□□□ -2.07
SSU72P53538 CRS5YOR031W 210 nt2.09□□□□□ -2.07
SSU72P53538 CIN2YPL241C 807 nt2.09□□□□□ -2.07
SSU72P53538 ARL1YBR164C 552 nt2.09□□□□□ -2.07
SSU72P53538 YJL181WYJL181W 1836 nt2.09□□□□□ -2.08
SSU72P53538 TPS2YDR074W 2691 nt2.09□□□□□ -2.08
SSU72P53538 TRM2YKR056W 1920 nt2.09□□□□□ -2.08
SSU72P53538 HRD3YLR207W 2502 nt2.09□□□□□ -2.08
SSU72P53538 DNL4YOR005C 2835 nt2.09□□□□□ -2.08
SSU72P53538 ARP5YNL059C 2268 nt2.08□□□□□ -2.08
SSU72P53538 PDR1YGL013C 3207 nt2.08□□□□□ -2.08
SSU72P53538 HLR1YDR528W 1272 nt2.08□□□□□ -2.08
SSU72P53538 VAB2YEL005C 849 nt2.08□□□□□ -2.08
SSU72P53538 DSE2YHR143W 978 nt2.08□□□□□ -2.08
SSU72P53538 YJL202CYJL202C 348 nt2.08□□□□□ -2.08
SSU72P53538 YKL115CYKL115C 393 nt2.08□□□□□ -2.08
SSU72P53538 YLR050CYLR050C 486 nt2.08□□□□□ -2.08
SSU72P53538 LIP2YLR239C 987 nt2.08□□□□□ -2.08
SSU72P53538 IGO1YNL157W 507 nt2.08□□□□□ -2.08
SSU72P53538 snR24snR24 89 nt2.08□□□□□ -2.08
SSU72P53538 ARP8YOR141C 2646 nt2.08□□□□□ -2.08
SSU72P53538 RAV1YJR033C 4074 nt2.08□□□□□ -2.08
SSU72P53538 HOP1YIL072W 1818 nt2.07□□□□□ -2.08
SSU72P53538 PDR11YIL013C 4236 nt2.07□□□□□ -2.08
SSU72P53538 YDR381C-AYDR381C-A 345 nt2.07□□□□□ -2.08
SSU72P53538 COX3Q0275 810 nt2.07□□□□□ -2.08
SSU72P53538 GPI14YJR013W 1212 nt2.07□□□□□ -2.08
SSU72P53538 YKL069WYKL069W 543 nt2.07□□□□□ -2.08
SSU72P53538 YPT6YLR262C 648 nt2.07□□□□□ -2.08
SSU72P53538 YNL089CYNL089C 477 nt2.07□□□□□ -2.08
SSU72P53538 PEX17YNL214W 600 nt2.07□□□□□ -2.08
SSU72P53538 PEX27YOR193W 1131 nt2.07□□□□□ -2.08
SSU72P53538 YOR331CYOR331C 558 nt2.07□□□□□ -2.08
SSU72P53538 SGS1YMR190C 4344 nt2.07□□□□□ -2.08
SSU72P53538 SNU114YKL173W 3027 nt2.07□□□□□ -2.08
SSU72P53538 SLU7YDR088C 1149 nt2.06□□□□□ -2.08
SSU72P53538 CPR5YDR304C 678 nt2.06□□□□□ -2.08
SSU72P53538 EMI1YDR512C 564 nt2.06□□□□□ -2.08
SSU72P53538 YGL039WYGL039W 1047 nt2.06□□□□□ -2.08
SSU72P53538 YIL046W-AYIL046W-A 165 nt2.06□□□□□ -2.08
SSU72P53538 MBB1YJL199C 327 nt2.06□□□□□ -2.08
SSU72P53538 YLR154W-AYLR154W-A 186 nt2.06□□□□□ -2.08
SSU72P53538 YKE2YLR200W 345 nt2.06□□□□□ -2.08
SSU72P53538 RPS17AYML024W 411 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms