Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGA2P52926 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 UNC93B3-201ENST00000308076 687 ntBASIC18.95■□□□□ 0.62
HMGA2P52926 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGA2P52926 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGA2P52926 AC105233.4-201ENST00000642045 216 ntBASIC18.95■□□□□ 0.62
HMGA2P52926 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGA2P52926 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGA2P52926 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA2P52926 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 PCDHAC2-203ENST00000615316 3011 ntBASIC18.94■□□□□ 0.62
HMGA2P52926 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA2P52926 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGA2P52926 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA2P52926 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.94■□□□□ 0.62
HMGA2P52926 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGA2P52926 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 AP004607.4-201ENST00000530158 1459 ntBASIC18.94■□□□□ 0.62
HMGA2P52926 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGA2P52926 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMGA2P52926 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA2P52926 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA2P52926 AC112907.3-201ENST00000577781 2400 ntBASIC18.93■□□□□ 0.62
HMGA2P52926 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGA2P52926 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGA2P52926 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGA2P52926 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HMGA2P52926 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGA2P52926 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.93■□□□□ 0.62
HMGA2P52926 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA2P52926 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
HMGA2P52926 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HMGA2P52926 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA2P52926 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.92■□□□□ 0.62
HMGA2P52926 AC024257.2-201ENST00000549699 147 ntBASIC18.92■□□□□ 0.62
HMGA2P52926 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA2P52926 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMGA2P52926 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HMGA2P52926 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HMGA2P52926 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HMGA2P52926 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGA2P52926 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGA2P52926 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.91■□□□□ 0.62
HMGA2P52926 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGA2P52926 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HMGA2P52926 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGA2P52926 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA2P52926 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 AC061975.6-201ENST00000579045 1553 ntBASIC18.9■□□□□ 0.62
HMGA2P52926 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
HMGA2P52926 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms