Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN4P51793 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN4P51793 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLCN4P51793 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
CLCN4P51793 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLCN4P51793 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN4P51793 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN4P51793 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN4P51793 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.91■■□□□ 1.1
CLCN4P51793 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.91■■□□□ 1.1
CLCN4P51793 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.91■■□□□ 1.1
CLCN4P51793 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLCN4P51793 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.91■■□□□ 1.1
CLCN4P51793 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN4P51793 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN4P51793 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
CLCN4P51793 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.9■■□□□ 1.1
CLCN4P51793 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.9■■□□□ 1.1
CLCN4P51793 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLCN4P51793 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CLCN4P51793 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.9■■□□□ 1.1
CLCN4P51793 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.89■■□□□ 1.1
CLCN4P51793 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CLCN4P51793 FAM99A-202ENST00000538190 1989 ntBASIC21.89■■□□□ 1.09
CLCN4P51793 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN4P51793 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CLCN4P51793 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN4P51793 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.89■■□□□ 1.09
CLCN4P51793 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
CLCN4P51793 RPPH1-201ENST00000516869 333 ntBASIC21.89■■□□□ 1.09
CLCN4P51793 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.89■■□□□ 1.09
CLCN4P51793 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLCN4P51793 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.89■■□□□ 1.09
CLCN4P51793 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLCN4P51793 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.89■■□□□ 1.09
CLCN4P51793 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CLCN4P51793 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
CLCN4P51793 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN4P51793 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN4P51793 KRT17P3-201ENST00000420566 1262 ntBASIC21.88■■□□□ 1.09
CLCN4P51793 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.88■■□□□ 1.09
CLCN4P51793 C1QBPP2-201ENST00000528754 825 ntBASIC21.88■■□□□ 1.09
CLCN4P51793 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN4P51793 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN4P51793 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.88■■□□□ 1.09
CLCN4P51793 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLCN4P51793 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.88■■□□□ 1.09
CLCN4P51793 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.87■■□□□ 1.09
CLCN4P51793 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 AL117328.2-201ENST00000624617 1940 ntBASIC21.87■■□□□ 1.09
CLCN4P51793 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CLCN4P51793 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.87■■□□□ 1.09
CLCN4P51793 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.87■■□□□ 1.09
CLCN4P51793 CYP21A1P-202ENST00000354927 1481 ntBASIC21.87■■□□□ 1.09
CLCN4P51793 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CLCN4P51793 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CLCN4P51793 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLCN4P51793 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.87■■□□□ 1.09
CLCN4P51793 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN4P51793 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
CLCN4P51793 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.86■■□□□ 1.09
CLCN4P51793 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.86■■□□□ 1.09
CLCN4P51793 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CLCN4P51793 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CLCN4P51793 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.86■■□□□ 1.09
CLCN4P51793 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 RN7SL471P-201ENST00000580476 299 ntBASIC21.86■■□□□ 1.09
CLCN4P51793 FAM197Y4-202ENST00000622692 608 ntBASIC21.86■■□□□ 1.09
CLCN4P51793 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.86■■□□□ 1.09
CLCN4P51793 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLCN4P51793 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms