Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 AVT5YBL089W 1380 nt1.29□□□□□ -2.2
VPS55P47111 YCT1YLL055W 1596 nt1.29□□□□□ -2.2
VPS55P47111 HSH155YMR288W 2916 nt1.29□□□□□ -2.2
VPS55P47111 RKM1YPL208W 1752 nt1.29□□□□□ -2.2
VPS55P47111 PDR8YLR266C 2106 nt1.28□□□□□ -2.2
VPS55P47111 SFB2YNL049C 2631 nt1.28□□□□□ -2.2
VPS55P47111 DSS1YMR287C 2910 nt1.28□□□□□ -2.2
VPS55P47111 RPS17BYDR447C 411 nt1.28□□□□□ -2.2
VPS55P47111 PEX21YGR239C 867 nt1.28□□□□□ -2.2
VPS55P47111 YKL069WYKL069W 543 nt1.28□□□□□ -2.2
VPS55P47111 RDN58-1RDN58-1 158 nt1.28□□□□□ -2.2
VPS55P47111 RDN58-2RDN58-2 158 nt1.28□□□□□ -2.2
VPS55P47111 PIN3YPR154W 648 nt1.28□□□□□ -2.2
VPS55P47111 CLB5YPR120C 1308 nt1.28□□□□□ -2.2
VPS55P47111 ATG9YDL149W 2994 nt1.27□□□□□ -2.21
VPS55P47111 ARP5YNL059C 2268 nt1.27□□□□□ -2.21
VPS55P47111 CPR5YDR304C 678 nt1.27□□□□□ -2.21
VPS55P47111 IRC6YFR043C 714 nt1.27□□□□□ -2.21
VPS55P47111 YGR114CYGR114C 390 nt1.27□□□□□ -2.21
VPS55P47111 YJL169WYJL169W 369 nt1.27□□□□□ -2.21
VPS55P47111 YLR402WYLR402W 192 nt1.27□□□□□ -2.21
VPS55P47111 VPS8YAL002W 3825 nt1.26□□□□□ -2.21
VPS55P47111 IPT1YDR072C 1584 nt1.26□□□□□ -2.21
VPS55P47111 URB2YJR041C 3525 nt1.26□□□□□ -2.21
VPS55P47111 YNL144CYNL144C 2223 nt1.26□□□□□ -2.21
VPS55P47111 TRM82YDR165W 1335 nt1.26□□□□□ -2.21
VPS55P47111 RBK1YCR036W 1002 nt1.26□□□□□ -2.21
VPS55P47111 TSC13YDL015C 933 nt1.26□□□□□ -2.21
VPS55P47111 CTH1YDR151C 978 nt1.26□□□□□ -2.21
VPS55P47111 DDI2YFL061W 678 nt1.26□□□□□ -2.21
VPS55P47111 YGL138CYGL138C 1038 nt1.26□□□□□ -2.21
VPS55P47111 TAN1YGL232W 870 nt1.26□□□□□ -2.21
VPS55P47111 YGR064WYGR064W 369 nt1.26□□□□□ -2.21
VPS55P47111 RLP24YLR009W 600 nt1.26□□□□□ -2.21
VPS55P47111 SYM1YLR251W 594 nt1.26□□□□□ -2.21
VPS55P47111 CSI1YMR025W 888 nt1.26□□□□□ -2.21
VPS55P47111 MRPS17YMR188C 714 nt1.26□□□□□ -2.21
VPS55P47111 LTP1YPR073C 486 nt1.26□□□□□ -2.21
VPS55P47111 CBF2YGR140W 2871 nt1.26□□□□□ -2.21
VPS55P47111 PKH3YDR466W 2697 nt1.26□□□□□ -2.21
VPS55P47111 MEC1YBR136W 7107 nt1.26□□□□□ -2.21
VPS55P47111 BIT61YJL058C 1632 nt1.26□□□□□ -2.21
VPS55P47111 BRE5YNR051C 1548 nt1.25□□□□□ -2.21
VPS55P47111 TFB1YDR311W 1929 nt1.25□□□□□ -2.21
VPS55P47111 MGA2YIR033W 3342 nt1.25□□□□□ -2.21
VPS55P47111 GUK1YDR454C 564 nt1.25□□□□□ -2.21
VPS55P47111 SEC4YFL005W 648 nt1.25□□□□□ -2.21
VPS55P47111 ANS1YHR126C 480 nt1.25□□□□□ -2.21
VPS55P47111 YIL058WYIL058W 285 nt1.25□□□□□ -2.21
VPS55P47111 CAP1YKL007W 807 nt1.25□□□□□ -2.21
VPS55P47111 URA5YML106W 681 nt1.25□□□□□ -2.21
VPS55P47111 MRPL44YMR225C 297 nt1.25□□□□□ -2.21
VPS55P47111 YBR174CYBR174C 315 nt1.25□□□□□ -2.21
VPS55P47111 RTG3YBL103C 1461 nt1.24□□□□□ -2.21
VPS55P47111 RGA2YDR379W 3030 nt1.24□□□□□ -2.21
VPS55P47111 TPK3YKL166C 1197 nt1.24□□□□□ -2.21
VPS55P47111 YHC1YLR298C 696 nt1.24□□□□□ -2.21
VPS55P47111 FMP41YNL168C 780 nt1.24□□□□□ -2.21
VPS55P47111 GCY1YOR120W 939 nt1.24□□□□□ -2.21
VPS55P47111 DSE3YOR264W 1293 nt1.24□□□□□ -2.21
VPS55P47111 ARL1YBR164C 552 nt1.24□□□□□ -2.21
VPS55P47111 ATP17YDR377W 306 nt1.23□□□□□ -2.21
VPS55P47111 NCB2YDR397C 441 nt1.23□□□□□ -2.21
VPS55P47111 HLR1YDR528W 1272 nt1.23□□□□□ -2.21
VPS55P47111 YHL037CYHL037C 402 nt1.23□□□□□ -2.21
VPS55P47111 YIR036W-AYIR036W-A 402 nt1.23□□□□□ -2.21
VPS55P47111 MEI5YPL121C 669 nt1.23□□□□□ -2.21
VPS55P47111 YRO2YBR054W 1035 nt1.23□□□□□ -2.21
VPS55P47111 APC2YLR127C 2562 nt1.23□□□□□ -2.21
VPS55P47111 BUD2YKL092C 3315 nt1.22□□□□□ -2.21
VPS55P47111 SSK2YNR031C 4740 nt1.22□□□□□ -2.21
VPS55P47111 YNR066CYNR066C 1311 nt1.22□□□□□ -2.21
VPS55P47111 CAT8YMR280C 4302 nt1.22□□□□□ -2.21
VPS55P47111 AIM18YHR198C 966 nt1.22□□□□□ -2.21
VPS55P47111 YIL102CYIL102C 306 nt1.22□□□□□ -2.21
VPS55P47111 YKL070WYKL070W 510 nt1.22□□□□□ -2.21
VPS55P47111 HRI1YLR301W 735 nt1.22□□□□□ -2.21
VPS55P47111 YLR302CYLR302C 363 nt1.22□□□□□ -2.21
VPS55P47111 CHS1YNL192W 3396 nt1.22□□□□□ -2.21
VPS55P47111 PIK1YNL267W 3201 nt1.21□□□□□ -2.22
VPS55P47111 CFT2YLR115W 2580 nt1.21□□□□□ -2.22
VPS55P47111 SLF1YDR515W 1344 nt1.21□□□□□ -2.22
VPS55P47111 APC5YOR249C 2058 nt1.21□□□□□ -2.22
VPS55P47111 RUD3YOR216C 1455 nt1.21□□□□□ -2.22
VPS55P47111 IRC4YDR540C 540 nt1.21□□□□□ -2.22
VPS55P47111 CSM2YIL132C 642 nt1.21□□□□□ -2.22
VPS55P47111 PRM6YML047C 1059 nt1.21□□□□□ -2.22
VPS55P47111 YPR177CYPR177C 372 nt1.21□□□□□ -2.22
VPS55P47111 CCH1YGR217W 6120 nt1.21□□□□□ -2.22
VPS55P47111 YEL043WYEL043W 2871 nt1.21□□□□□ -2.22
VPS55P47111 PET127YOR017W 2403 nt1.2□□□□□ -2.22
VPS55P47111 LYS9YNR050C 1341 nt1.2□□□□□ -2.22
VPS55P47111 RTT101YJL047C 2529 nt1.2□□□□□ -2.22
VPS55P47111 MDM10YAL010C 1482 nt1.2□□□□□ -2.22
VPS55P47111 snR76snR76 109 nt1.2□□□□□ -2.22
VPS55P47111 SDC1YDR469W 528 nt1.2□□□□□ -2.22
VPS55P47111 YGL069CYGL069C 465 nt1.2□□□□□ -2.22
VPS55P47111 ACB1YGR037C 264 nt1.2□□□□□ -2.22
VPS55P47111 RNP1YLL046C 750 nt1.2□□□□□ -2.22
VPS55P47111 REX3YLR107W 1215 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 29.8 ms