Protein–RNA interactions for Protein: P46970

NMD5, Nonsense-mediated mRNA decay protein 5, yeastyeast

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD5P46970 YLR224WYLR224W 1110 nt3.29□□□□□ -1.88
NMD5P46970 SET1YHR119W 3243 nt3.29□□□□□ -1.88
NMD5P46970 PIN4YBL051C 2007 nt3.29□□□□□ -1.88
NMD5P46970 CHS2YBR038W 2892 nt3.29□□□□□ -1.88
NMD5P46970 ATP25YMR098C 1839 nt3.28□□□□□ -1.88
NMD5P46970 YER006C-AYER006C-A 318 nt3.28□□□□□ -1.88
NMD5P46970 YGL063C-AYGL063C-A 150 nt3.28□□□□□ -1.88
NMD5P46970 PCL5YHR071W 690 nt3.28□□□□□ -1.88
NMD5P46970 DLS1YJL065C 504 nt3.28□□□□□ -1.88
NMD5P46970 TDA8YAL064C-A 381 nt3.28□□□□□ -1.88
NMD5P46970 YML108WYML108W 318 nt3.28□□□□□ -1.88
NMD5P46970 RPS16AYMR143W 432 nt3.28□□□□□ -1.88
NMD5P46970 PEX11YOL147C 711 nt3.28□□□□□ -1.88
NMD5P46970 YOR053WYOR053W 342 nt3.28□□□□□ -1.88
NMD5P46970 YPR096CYPR096C 303 nt3.28□□□□□ -1.88
NMD5P46970 YPR197CYPR197C 564 nt3.28□□□□□ -1.88
NMD5P46970 YBR285WYBR285W 435 nt3.28□□□□□ -1.88
NMD5P46970 ATG26YLR189C 3597 nt3.28□□□□□ -1.88
NMD5P46970 RPN2YIL075C 2838 nt3.27□□□□□ -1.89
NMD5P46970 SLK19YOR195W 2466 nt3.27□□□□□ -1.89
NMD5P46970 snR68snR68 136 nt3.27□□□□□ -1.89
NMD5P46970 YER039C-AYER039C-A 219 nt3.27□□□□□ -1.89
NMD5P46970 RPL1BYGL135W 654 nt3.27□□□□□ -1.89
NMD5P46970 YGR017WYGR017W 894 nt3.27□□□□□ -1.89
NMD5P46970 AGE2YIL044C 897 nt3.27□□□□□ -1.89
NMD5P46970 YLR416CYLR416C 399 nt3.27□□□□□ -1.89
NMD5P46970 TVP18YMR071C 504 nt3.27□□□□□ -1.89
NMD5P46970 RIO2YNL207W 1278 nt3.27□□□□□ -1.89
NMD5P46970 YOR392WYOR392W 444 nt3.27□□□□□ -1.89
NMD5P46970 RPL1AYPL220W 654 nt3.27□□□□□ -1.89
NMD5P46970 snR54snR54 86 nt3.27□□□□□ -1.89
NMD5P46970 SWC4YGR002C 1431 nt3.27□□□□□ -1.89
NMD5P46970 SHE4YOR035C 2370 nt3.26□□□□□ -1.89
NMD5P46970 NMD2YHR077C 3270 nt3.26□□□□□ -1.89
NMD5P46970 YCR045W-AYCR045W-A 351 nt3.26□□□□□ -1.89
NMD5P46970 STE14YDR410C 720 nt3.26□□□□□ -1.89
NMD5P46970 YDR537CYDR537C 606 nt3.26□□□□□ -1.89
NMD5P46970 RPS20YHL015W 366 nt3.26□□□□□ -1.89
NMD5P46970 SPC1YJR010C-A 285 nt3.26□□□□□ -1.89
NMD5P46970 YNL184CYNL184C 327 nt3.26□□□□□ -1.89
NMD5P46970 INO4YOL108C 456 nt3.26□□□□□ -1.89
NMD5P46970 YBR076C-AYBR076C-A 267 nt3.26□□□□□ -1.89
NMD5P46970 DPB3YBR278W 606 nt3.26□□□□□ -1.89
NMD5P46970 YAK1YJL141C 2424 nt3.26□□□□□ -1.89
NMD5P46970 RRI2YOL117W 1938 nt3.26□□□□□ -1.89
NMD5P46970 SHS1YDL225W 1656 nt3.26□□□□□ -1.89
NMD5P46970 CDC40YDR364C 1368 nt3.25□□□□□ -1.89
NMD5P46970 FAS1YKL182W 6156 nt3.25□□□□□ -1.89
NMD5P46970 SQS1YNL224C 2304 nt3.25□□□□□ -1.89
NMD5P46970 PAM1YDR251W 2493 nt3.25□□□□□ -1.89
NMD5P46970 HRD1YOL013C 1656 nt3.25□□□□□ -1.89
NMD5P46970 OPI6YDL096C 327 nt3.25□□□□□ -1.89
NMD5P46970 LIF1YGL090W 1266 nt3.25□□□□□ -1.89
NMD5P46970 RTS3YGR161C 792 nt3.25□□□□□ -1.89
NMD5P46970 PEP8YJL053W 1140 nt3.25□□□□□ -1.89
NMD5P46970 RPS1AYLR441C 768 nt3.25□□□□□ -1.89
NMD5P46970 YMR193C-AYMR193C-A 387 nt3.25□□□□□ -1.89
NMD5P46970 HHF1YBR009C 312 nt3.25□□□□□ -1.89
NMD5P46970 YBR062CYBR062C 543 nt3.25□□□□□ -1.89
NMD5P46970 YGR237CYGR237C 2358 nt3.25□□□□□ -1.89
NMD5P46970 MDM36YPR083W 1740 nt3.24□□□□□ -1.89
NMD5P46970 PFK26YIL107C 2484 nt3.24□□□□□ -1.89
NMD5P46970 RTT102YGR275W 474 nt3.24□□□□□ -1.89
NMD5P46970 YIL115W-AYIL115W-A 372 nt3.24□□□□□ -1.89
NMD5P46970 YIL141WYIL141W 390 nt3.24□□□□□ -1.89
NMD5P46970 YMR013C-AYMR013C-A 150 nt3.24□□□□□ -1.89
NMD5P46970 ATX1YNL259C 222 nt3.24□□□□□ -1.89
NMD5P46970 SRL1YOR247W 633 nt3.24□□□□□ -1.89
NMD5P46970 YBR051WYBR051W 351 nt3.24□□□□□ -1.89
NMD5P46970 snR35snR35 204 nt3.24□□□□□ -1.89
NMD5P46970 MBA1YBR185C 837 nt3.24□□□□□ -1.89
NMD5P46970 VIP1YLR410W 3441 nt3.24□□□□□ -1.89
NMD5P46970 SYO1YDL063C 1863 nt3.24□□□□□ -1.89
NMD5P46970 HAA1YPR008W 2085 nt3.23□□□□□ -1.89
NMD5P46970 GPI19YDR437W 423 nt3.23□□□□□ -1.89
NMD5P46970 GRX2YDR513W 432 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)DtK(UUU)D 73 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)G1tK(UUU)G1 73 nt3.23□□□□□ -1.89
NMD5P46970 YER181CYER181C 324 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)G2tK(UUU)G2 73 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)KtK(UUU)K 73 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)LtK(UUU)L 73 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)OtK(UUU)O 73 nt3.23□□□□□ -1.89
NMD5P46970 tK(UUU)PtK(UUU)P 73 nt3.23□□□□□ -1.89
NMD5P46970 CDC26YFR036W 375 nt3.23□□□□□ -1.89
NMD5P46970 CRG1YHR209W 876 nt3.23□□□□□ -1.89
NMD5P46970 YHR214C-CYHR214C-C 1437 nt3.23□□□□□ -1.89
NMD5P46970 HIT1YJR055W 495 nt3.23□□□□□ -1.89
NMD5P46970 RNH203YLR154C 333 nt3.23□□□□□ -1.89
NMD5P46970 RPL6BYLR448W 531 nt3.23□□□□□ -1.89
NMD5P46970 YBL039W-BYBL039W-B 180 nt3.23□□□□□ -1.89
NMD5P46970 YOL019W-AYOL019W-A 153 nt3.23□□□□□ -1.89
NMD5P46970 RPS7AYOR096W 573 nt3.23□□□□□ -1.89
NMD5P46970 BRE5YNR051C 1548 nt3.23□□□□□ -1.89
NMD5P46970 AKR1YDR264C 2295 nt3.22□□□□□ -1.89
NMD5P46970 GCD6YDR211W 2139 nt3.22□□□□□ -1.89
NMD5P46970 SRD1YCR018C 666 nt3.22□□□□□ -1.89
NMD5P46970 BMH2YDR099W 822 nt3.22□□□□□ -1.89
NMD5P46970 MIC19YFR011C 513 nt3.22□□□□□ -1.89
NMD5P46970 YKL068W-AYKL068W-A 237 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms