Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 LINC01529-204ENST00000636474 1715 ntBASIC18.67■□□□□ 0.58
NR4A2P43354 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.67■□□□□ 0.58
NR4A2P43354 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NR4A2P43354 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.67■□□□□ 0.58
NR4A2P43354 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 PCDHAC2-203ENST00000615316 3011 ntBASIC18.67■□□□□ 0.58
NR4A2P43354 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NR4A2P43354 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NR4A2P43354 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.66■□□□□ 0.58
NR4A2P43354 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NR4A2P43354 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 MIR572-201ENST00000384983 95 ntBASIC18.66■□□□□ 0.58
NR4A2P43354 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
NR4A2P43354 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NR4A2P43354 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NR4A2P43354 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 DUX4L4-201ENST00000566884 1269 ntBASIC18.65■□□□□ 0.58
NR4A2P43354 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
NR4A2P43354 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NR4A2P43354 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NR4A2P43354 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NR4A2P43354 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NR4A2P43354 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NR4A2P43354 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.64■□□□□ 0.57
NR4A2P43354 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NR4A2P43354 AC027612.3-201ENST00000413684 1047 ntBASIC18.64■□□□□ 0.57
NR4A2P43354 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 OR2I1P-207ENST00000453522 948 ntBASIC18.64■□□□□ 0.57
NR4A2P43354 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.64■□□□□ 0.57
NR4A2P43354 AL354811.1-201ENST00000610286 706 ntBASIC18.64■□□□□ 0.57
NR4A2P43354 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.64■□□□□ 0.57
NR4A2P43354 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NR4A2P43354 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NR4A2P43354 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NR4A2P43354 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.64■□□□□ 0.57
NR4A2P43354 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NR4A2P43354 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NR4A2P43354 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NR4A2P43354 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
NR4A2P43354 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms