Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR2P43308 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.76■□□□□ 0.75
SSR2P43308 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSR2P43308 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SSR2P43308 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR2P43308 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SSR2P43308 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR2P43308 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR2P43308 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.75■□□□□ 0.75
SSR2P43308 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.75■□□□□ 0.75
SSR2P43308 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR2P43308 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.75■□□□□ 0.75
SSR2P43308 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.75■□□□□ 0.75
SSR2P43308 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.75■□□□□ 0.75
SSR2P43308 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SSR2P43308 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SSR2P43308 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SSR2P43308 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.75■□□□□ 0.75
SSR2P43308 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.74■□□□□ 0.75
SSR2P43308 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR2P43308 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SSR2P43308 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.74■□□□□ 0.75
SSR2P43308 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 SLC7A5P1-201ENST00000568957 537 ntBASIC19.74■□□□□ 0.75
SSR2P43308 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 RARRES2P11-201ENST00000635158 484 ntBASIC19.74■□□□□ 0.75
SSR2P43308 MYCNOS-205ENST00000641950 531 ntBASIC19.74■□□□□ 0.75
SSR2P43308 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.74■□□□□ 0.75
SSR2P43308 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SSR2P43308 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR2P43308 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSR2P43308 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR2P43308 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSR2P43308 AC016769.1-201ENST00000409132 1010 ntBASIC19.73■□□□□ 0.75
SSR2P43308 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.73■□□□□ 0.75
SSR2P43308 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.73■□□□□ 0.75
SSR2P43308 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.73■□□□□ 0.75
SSR2P43308 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR2P43308 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR2P43308 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
SSR2P43308 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSR2P43308 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.72■□□□□ 0.75
SSR2P43308 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.72■□□□□ 0.75
SSR2P43308 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.72■□□□□ 0.75
SSR2P43308 AC121338.2-201ENST00000622535 1744 ntBASIC19.72■□□□□ 0.75
SSR2P43308 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR2P43308 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.71■□□□□ 0.75
SSR2P43308 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SSR2P43308 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR2P43308 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SSR2P43308 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR2P43308 KRT18P11-201ENST00000435214 1283 ntBASIC19.71■□□□□ 0.75
SSR2P43308 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SSR2P43308 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR2P43308 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.71■□□□□ 0.75
SSR2P43308 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR2P43308 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms