Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 DFG10YIL049W 762 nt4.38□□□□□ -1.71
MSH4P40965 YKE2YLR200W 345 nt4.38□□□□□ -1.71
MSH4P40965 YMR013C-AYMR013C-A 150 nt4.38□□□□□ -1.71
MSH4P40965 YBL039W-BYBL039W-B 180 nt4.38□□□□□ -1.71
MSH4P40965 ZDS1YMR273C 2748 nt4.38□□□□□ -1.71
MSH4P40965 MNT4YNR059W 1743 nt4.38□□□□□ -1.71
MSH4P40965 SPE1YKL184W 1401 nt4.38□□□□□ -1.71
MSH4P40965 YRM1YOR172W 2361 nt4.38□□□□□ -1.71
MSH4P40965 MLH2YLR035C 2088 nt4.37□□□□□ -1.71
MSH4P40965 JIP5YPR169W 1479 nt4.37□□□□□ -1.71
MSH4P40965 FRE4YNR060W 2160 nt4.37□□□□□ -1.71
MSH4P40965 TAF6YGL112C 1551 nt4.37□□□□□ -1.71
MSH4P40965 YCR045W-AYCR045W-A 351 nt4.37□□□□□ -1.71
MSH4P40965 YGL007C-AYGL007C-A 87 nt4.37□□□□□ -1.71
MSH4P40965 tM(CAU)Q1tM(CAU)Q1 76 nt4.37□□□□□ -1.71
MSH4P40965 OTU2YHL013C 924 nt4.37□□□□□ -1.71
MSH4P40965 YHR063W-AYHR063W-A 336 nt4.37□□□□□ -1.71
MSH4P40965 YBL028CYBL028C 321 nt4.37□□□□□ -1.71
MSH4P40965 IRC16YPR038W 360 nt4.37□□□□□ -1.71
MSH4P40965 SEG1YMR086W 2883 nt4.37□□□□□ -1.71
MSH4P40965 SSF1YHR066W 1362 nt4.37□□□□□ -1.71
MSH4P40965 GNT1YOR320C 1476 nt4.37□□□□□ -1.71
MSH4P40965 FUN12YAL035W 3009 nt4.36□□□□□ -1.71
MSH4P40965 YGL140CYGL140C 3660 nt4.36□□□□□ -1.71
MSH4P40965 snR68snR68 136 nt4.36□□□□□ -1.71
MSH4P40965 RTR2YDR066C 591 nt4.36□□□□□ -1.71
MSH4P40965 YDR431WYDR431W 312 nt4.36□□□□□ -1.71
MSH4P40965 YIL054WYIL054W 318 nt4.36□□□□□ -1.71
MSH4P40965 RPS16AYMR143W 432 nt4.36□□□□□ -1.71
MSH4P40965 CDC33YOL139C 642 nt4.36□□□□□ -1.71
MSH4P40965 GAC1YOR178C 2382 nt4.36□□□□□ -1.71
MSH4P40965 SLK19YOR195W 2466 nt4.36□□□□□ -1.71
MSH4P40965 BFR1YOR198C 1413 nt4.36□□□□□ -1.71
MSH4P40965 ADI1YMR009W 540 nt4.35□□□□□ -1.71
MSH4P40965 PKR1YMR123W 369 nt4.35□□□□□ -1.71
MSH4P40965 YMR304C-AYMR304C-A 351 nt4.35□□□□□ -1.71
MSH4P40965 YMR320WYMR320W 306 nt4.35□□□□□ -1.71
MSH4P40965 BI4Q0120 1917 nt4.34□□□□□ -1.71
MSH4P40965 SLM2YNL047C 1971 nt4.34□□□□□ -1.71
MSH4P40965 EMC1YCL045C 2283 nt4.34□□□□□ -1.71
MSH4P40965 MAK5YBR142W 2322 nt4.34□□□□□ -1.71
MSH4P40965 GPI13YLL031C 3054 nt4.34□□□□□ -1.71
MSH4P40965 PCL5YHR071W 690 nt4.34□□□□□ -1.71
MSH4P40965 COX19YLL018C-A 297 nt4.34□□□□□ -1.71
MSH4P40965 ECM16YMR128W 3804 nt4.34□□□□□ -1.71
MSH4P40965 COX7YMR256C 183 nt4.34□□□□□ -1.71
MSH4P40965 YPR039WYPR039W 336 nt4.34□□□□□ -1.71
MSH4P40965 SHS1YDL225W 1656 nt4.34□□□□□ -1.71
MSH4P40965 NDC80YIL144W 2076 nt4.34□□□□□ -1.71
MSH4P40965 RAD4YER162C 2265 nt4.33□□□□□ -1.72
MSH4P40965 SDH7YDR511W 402 nt4.33□□□□□ -1.72
MSH4P40965 YJL086CYJL086C 369 nt4.33□□□□□ -1.72
MSH4P40965 YOP1YPR028W 543 nt4.33□□□□□ -1.72
MSH4P40965 YBR201C-AYBR201C-A 204 nt4.33□□□□□ -1.72
MSH4P40965 VPS53YJL029C 2469 nt4.33□□□□□ -1.72
MSH4P40965 ERB1YMR049C 2424 nt4.33□□□□□ -1.72
MSH4P40965 APC5YOR249C 2058 nt4.33□□□□□ -1.72
MSH4P40965 KRI1YNL308C 1776 nt4.32□□□□□ -1.72
MSH4P40965 YDR089WYDR089W 2610 nt4.32□□□□□ -1.72
MSH4P40965 NUP159YIL115C 4383 nt4.32□□□□□ -1.72
MSH4P40965 IRC2YDR112W 309 nt4.32□□□□□ -1.72
MSH4P40965 YEL075CYEL075C 369 nt4.32□□□□□ -1.72
MSH4P40965 RTT105YER104W 627 nt4.32□□□□□ -1.72
MSH4P40965 VOA1YGR106C 798 nt4.32□□□□□ -1.72
MSH4P40965 RPA12YJR063W 378 nt4.32□□□□□ -1.72
MSH4P40965 DPB3YBR278W 606 nt4.32□□□□□ -1.72
MSH4P40965 NOG1YPL093W 1944 nt4.32□□□□□ -1.72
MSH4P40965 SWH1YAR042W 3567 nt4.32□□□□□ -1.72
MSH4P40965 PSP1YDR505C 2526 nt4.31□□□□□ -1.72
MSH4P40965 PEX6YNL329C 3093 nt4.31□□□□□ -1.72
MSH4P40965 YPR010C-AYPR010C-A 219 nt4.31□□□□□ -1.72
MSH4P40965 HDA2YDR295C 2025 nt4.3□□□□□ -1.72
MSH4P40965 YDR090CYDR090C 933 nt4.3□□□□□ -1.72
MSH4P40965 HTA1YDR225W 399 nt4.3□□□□□ -1.72
MSH4P40965 GRX2YDR513W 432 nt4.3□□□□□ -1.72
MSH4P40965 RPS24BYIL069C 408 nt4.3□□□□□ -1.72
MSH4P40965 YAL037WYAL037W 804 nt4.3□□□□□ -1.72
MSH4P40965 ICY1YMR195W 384 nt4.3□□□□□ -1.72
MSH4P40965 ATP3YBR039W 936 nt4.3□□□□□ -1.72
MSH4P40965 KAR9YPL269W 1935 nt4.3□□□□□ -1.72
MSH4P40965 RAD26YJR035W 3258 nt4.29□□□□□ -1.72
MSH4P40965 GPI17YDR434W 1605 nt4.29□□□□□ -1.72
MSH4P40965 REB1YBR049C 2433 nt4.29□□□□□ -1.72
MSH4P40965 ECO1YFR027W 846 nt4.29□□□□□ -1.72
MSH4P40965 GEP4YHR100C 558 nt4.29□□□□□ -1.72
MSH4P40965 MYO3YKL129C 3819 nt4.29□□□□□ -1.72
MSH4P40965 YMR290W-AYMR290W-A 348 nt4.29□□□□□ -1.72
MSH4P40965 RPC40YPR110C 1008 nt4.29□□□□□ -1.72
MSH4P40965 POL4YCR014C 1749 nt4.29□□□□□ -1.72
MSH4P40965 FLO10YKR102W 3510 nt4.29□□□□□ -1.72
MSH4P40965 SYO1YDL063C 1863 nt4.28□□□□□ -1.72
MSH4P40965 YHL026CYHL026C 948 nt4.28□□□□□ -1.72
MSH4P40965 YLR076CYLR076C 423 nt4.28□□□□□ -1.72
MSH4P40965 RMP1YLR145W 606 nt4.28□□□□□ -1.72
MSH4P40965 VTI1YMR197C 654 nt4.28□□□□□ -1.72
MSH4P40965 SRL1YOR247W 633 nt4.28□□□□□ -1.72
MSH4P40965 SEC6YIL068C 2418 nt4.28□□□□□ -1.72
MSH4P40965 ATG21YPL100W 1491 nt4.28□□□□□ -1.72
MSH4P40965 SLA1YBL007C 3735 nt4.28□□□□□ -1.73
MSH4P40965 CAF130YGR134W 3369 nt4.27□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 30.7 ms