Protein–RNA interactions for Protein: P31385

DEP1, Transcriptional regulatory protein DEP1, yeastyeast

Predictions only

Length 405 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEP1P31385 TPK3YKL166C 1197 nt2.6□□□□□ -1.99
DEP1P31385 YLR012CYLR012C 300 nt2.6□□□□□ -1.99
DEP1P31385 YLR076CYLR076C 423 nt2.6□□□□□ -1.99
DEP1P31385 INP1YMR204C 1263 nt2.6□□□□□ -1.99
DEP1P31385 RPC40YPR110C 1008 nt2.6□□□□□ -1.99
DEP1P31385 YPL150WYPL150W 2706 nt2.6□□□□□ -1.99
DEP1P31385 POL4YCR014C 1749 nt2.59□□□□□ -1.99
DEP1P31385 CDC37YDR168W 1521 nt2.59□□□□□ -1.99
DEP1P31385 IRC8YJL051W 2469 nt2.59□□□□□ -1.99
DEP1P31385 RAV2YDR202C 1056 nt2.59□□□□□ -1.99
DEP1P31385 YDR248CYDR248C 582 nt2.59□□□□□ -1.99
DEP1P31385 RSM18YER050C 417 nt2.59□□□□□ -1.99
DEP1P31385 YLL044WYLL044W 447 nt2.59□□□□□ -1.99
DEP1P31385 ARL1YBR164C 552 nt2.59□□□□□ -1.99
DEP1P31385 SRP1YNL189W 1629 nt2.59□□□□□ -1.99
DEP1P31385 YNL011CYNL011C 1335 nt2.59□□□□□ -2
DEP1P31385 STE11YLR362W 2154 nt2.59□□□□□ -2
DEP1P31385 FAR11YNL127W 2862 nt2.58□□□□□ -2
DEP1P31385 YHR078WYHR078W 1659 nt2.58□□□□□ -2
DEP1P31385 snR68snR68 136 nt2.58□□□□□ -2
DEP1P31385 HLR1YDR528W 1272 nt2.58□□□□□ -2
DEP1P31385 YGL109WYGL109W 324 nt2.58□□□□□ -2
DEP1P31385 VMA10YHR039C-A 345 nt2.58□□□□□ -2
DEP1P31385 YHR180W-AYHR180W-A 183 nt2.58□□□□□ -2
DEP1P31385 YIL141WYIL141W 390 nt2.58□□□□□ -2
DEP1P31385 GRE2YOL151W 1029 nt2.58□□□□□ -2
DEP1P31385 YOR277CYOR277C 309 nt2.58□□□□□ -2
DEP1P31385 SHG1YBR258C 429 nt2.58□□□□□ -2
DEP1P31385 MDM36YPR083W 1740 nt2.58□□□□□ -2
DEP1P31385 BNI1YNL271C 5862 nt2.58□□□□□ -2
DEP1P31385 PDR1YGL013C 3207 nt2.58□□□□□ -2
DEP1P31385 HFM1YGL251C 3564 nt2.57□□□□□ -2
DEP1P31385 PEX5YDR244W 1839 nt2.57□□□□□ -2
DEP1P31385 FMN1YDR236C 657 nt2.57□□□□□ -2
DEP1P31385 YGL039WYGL039W 1047 nt2.57□□□□□ -2
DEP1P31385 YHR212CYHR212C 336 nt2.57□□□□□ -2
DEP1P31385 AIM19YIL087C 474 nt2.57□□□□□ -2
DEP1P31385 YAR060CYAR060C 336 nt2.57□□□□□ -2
DEP1P31385 RPS29AYLR388W 171 nt2.57□□□□□ -2
DEP1P31385 YPR153WYPR153W 423 nt2.57□□□□□ -2
DEP1P31385 YCL002CYCL002C 792 nt2.57□□□□□ -2
DEP1P31385 ADF1YCL058W-A 342 nt2.57□□□□□ -2
DEP1P31385 KHA1YJL094C 2622 nt2.57□□□□□ -2
DEP1P31385 SIN3YOL004W 4611 nt2.57□□□□□ -2
DEP1P31385 AVT5YBL089W 1380 nt2.57□□□□□ -2
DEP1P31385 NOP12YOL041C 1380 nt2.57□□□□□ -2
DEP1P31385 STH1YIL126W 4080 nt2.56□□□□□ -2
DEP1P31385 CWH41YGL027C 2502 nt2.56□□□□□ -2
DEP1P31385 SLD5YDR489W 885 nt2.56□□□□□ -2
DEP1P31385 SNO3YFL060C 669 nt2.56□□□□□ -2
DEP1P31385 YJL133C-AYJL133C-A 225 nt2.56□□□□□ -2
DEP1P31385 MRPL38YKL170W 417 nt2.56□□□□□ -2
DEP1P31385 YNL203CYNL203C 612 nt2.56□□□□□ -2
DEP1P31385 SNO2YNL334C 669 nt2.56□□□□□ -2
DEP1P31385 YDR186CYDR186C 2634 nt2.56□□□□□ -2
DEP1P31385 YCK2YNL154C 1641 nt2.56□□□□□ -2
DEP1P31385 MCD1YDL003W 1701 nt2.56□□□□□ -2
DEP1P31385 MED1YPR070W 1701 nt2.56□□□□□ -2
DEP1P31385 IRA2YOL081W 9240 nt2.55□□□□□ -2
DEP1P31385 AI2Q0055 2565 nt2.55□□□□□ -2
DEP1P31385 RSM28YDR494W 1086 nt2.55□□□□□ -2
DEP1P31385 YHR050W-AYHR050W-A 171 nt2.55□□□□□ -2
DEP1P31385 DSE2YHR143W 978 nt2.55□□□□□ -2
DEP1P31385 MUB1YMR100W 1863 nt2.55□□□□□ -2
DEP1P31385 PDR17YNL264C 1053 nt2.55□□□□□ -2
DEP1P31385 RPL25YOL127W 429 nt2.55□□□□□ -2
DEP1P31385 YPR147CYPR147C 915 nt2.55□□□□□ -2
DEP1P31385 21S_rRNA21S_rRNA 3296 nt2.55□□□□□ -2
DEP1P31385 ORC1YML065W 2745 nt2.55□□□□□ -2
DEP1P31385 STN1YDR082W 1485 nt2.54□□□□□ -2
DEP1P31385 YKL075CYKL075C 1353 nt2.54□□□□□ -2
DEP1P31385 SLU7YDR088C 1149 nt2.54□□□□□ -2
DEP1P31385 YDR193WYDR193W 399 nt2.54□□□□□ -2
DEP1P31385 RPL27BYDR471W 411 nt2.54□□□□□ -2
DEP1P31385 MND1YGL183C 660 nt2.54□□□□□ -2
DEP1P31385 MVB12YGR206W 306 nt2.54□□□□□ -2
DEP1P31385 LSM8YJR022W 330 nt2.54□□□□□ -2
DEP1P31385 YLR271WYLR271W 825 nt2.54□□□□□ -2
DEP1P31385 DYN3YMR299C 939 nt2.54□□□□□ -2
DEP1P31385 CUR1YPR158W 759 nt2.54□□□□□ -2
DEP1P31385 AIM4YBR194W 372 nt2.54□□□□□ -2
DEP1P31385 YCL007CYCL007C 393 nt2.54□□□□□ -2
DEP1P31385 FRE8YLR047C 2061 nt2.54□□□□□ -2
DEP1P31385 SSN2YDR443C 4263 nt2.54□□□□□ -2
DEP1P31385 HBT1YDL223C 3141 nt2.53□□□□□ -2
DEP1P31385 SRD1YCR018C 666 nt2.53□□□□□ -2
DEP1P31385 YDL163WYDL163W 303 nt2.53□□□□□ -2
DEP1P31385 YFR054CYFR054C 579 nt2.53□□□□□ -2
DEP1P31385 SAE2YGL175C 1038 nt2.53□□□□□ -2
DEP1P31385 TAD1YGL243W 1203 nt2.53□□□□□ -2
DEP1P31385 YHR054CYHR054C 1065 nt2.53□□□□□ -2
DEP1P31385 ARC18YLR370C 537 nt2.53□□□□□ -2
DEP1P31385 SWD3YBR175W 948 nt2.53□□□□□ -2
DEP1P31385 SKO1YNL167C 1944 nt2.52□□□□□ -2.01
DEP1P31385 SLF1YDR515W 1344 nt2.52□□□□□ -2.01
DEP1P31385 DIG2YDR480W 972 nt2.52□□□□□ -2.01
DEP1P31385 YFL012W-AYFL012W-A 375 nt2.52□□□□□ -2.01
DEP1P31385 YIP1YGR172C 747 nt2.52□□□□□ -2.01
DEP1P31385 YAL059C-AYAL059C-A 423 nt2.52□□□□□ -2.01
DEP1P31385 RPL8BYLL045C 771 nt2.52□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms