Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YOL075CYOL075C 3885 nt4.24□□□□□ -1.73
MSH3P25336 DIT2YDR402C 1470 nt4.24□□□□□ -1.73
MSH3P25336 ATG21YPL100W 1491 nt4.24□□□□□ -1.73
MSH3P25336 NAT1YDL040C 2565 nt4.24□□□□□ -1.73
MSH3P25336 RPO31YOR116C 4383 nt4.24□□□□□ -1.73
MSH3P25336 HOP2YGL033W 657 nt4.24□□□□□ -1.73
MSH3P25336 RPS24BYIL069C 408 nt4.24□□□□□ -1.73
MSH3P25336 RAD14YMR201C 1116 nt4.24□□□□□ -1.73
MSH3P25336 INN1YNL152W 1230 nt4.24□□□□□ -1.73
MSH3P25336 PIS1YPR113W 663 nt4.24□□□□□ -1.73
MSH3P25336 SSE2YBR169C 2082 nt4.24□□□□□ -1.73
MSH3P25336 POL1YNL102W 4407 nt4.24□□□□□ -1.73
MSH3P25336 YRM1YOR172W 2361 nt4.24□□□□□ -1.73
MSH3P25336 TIF4631YGR162W 2859 nt4.24□□□□□ -1.73
MSH3P25336 NUP159YIL115C 4383 nt4.23□□□□□ -1.73
MSH3P25336 ECM16YMR128W 3804 nt4.23□□□□□ -1.73
MSH3P25336 ROD1YOR018W 2514 nt4.23□□□□□ -1.73
MSH3P25336 SMB1YER029C 591 nt4.23□□□□□ -1.73
MSH3P25336 YFR054CYFR054C 579 nt4.23□□□□□ -1.73
MSH3P25336 REC104YHR157W 549 nt4.23□□□□□ -1.73
MSH3P25336 YLR154W-BYLR154W-B 165 nt4.23□□□□□ -1.73
MSH3P25336 CWC24YLR323C 780 nt4.23□□□□□ -1.73
MSH3P25336 YLR428CYLR428C 345 nt4.23□□□□□ -1.73
MSH3P25336 YOL114CYOL114C 609 nt4.23□□□□□ -1.73
MSH3P25336 YPR039WYPR039W 336 nt4.23□□□□□ -1.73
MSH3P25336 IMH1YLR309C 2736 nt4.23□□□□□ -1.73
MSH3P25336 PDR12YPL058C 4536 nt4.22□□□□□ -1.73
MSH3P25336 snR65snR65 100 nt4.22□□□□□ -1.73
MSH3P25336 snR8snR8 190 nt4.22□□□□□ -1.73
MSH3P25336 YDR090CYDR090C 933 nt4.22□□□□□ -1.73
MSH3P25336 AHA1YDR214W 1053 nt4.22□□□□□ -1.73
MSH3P25336 HTA1YDR225W 399 nt4.22□□□□□ -1.73
MSH3P25336 RPS18AYDR450W 441 nt4.22□□□□□ -1.73
MSH3P25336 OTU2YHL013C 924 nt4.22□□□□□ -1.73
MSH3P25336 YHR032C-AYHR032C-A 120 nt4.22□□□□□ -1.73
MSH3P25336 ERP4YOR016C 624 nt4.22□□□□□ -1.73
MSH3P25336 FKH2YNL068C 2589 nt4.22□□□□□ -1.73
MSH3P25336 YBR225WYBR225W 2703 nt4.21□□□□□ -1.74
MSH3P25336 MRH1YDR033W 963 nt4.21□□□□□ -1.74
MSH3P25336 UNG1YML021C 1080 nt4.21□□□□□ -1.74
MSH3P25336 ICY1YMR195W 384 nt4.21□□□□□ -1.74
MSH3P25336 NHP2YDL208W 471 nt4.2□□□□□ -1.74
MSH3P25336 YPS5YGL259W 498 nt4.2□□□□□ -1.74
MSH3P25336 ROX1YPR065W 1107 nt4.2□□□□□ -1.74
MSH3P25336 APE2YKL157W 2859 nt4.2□□□□□ -1.74
MSH3P25336 FRE4YNR060W 2160 nt4.2□□□□□ -1.74
MSH3P25336 CEP3YMR168C 1827 nt4.19□□□□□ -1.74
MSH3P25336 YDR413CYDR413C 576 nt4.19□□□□□ -1.74
MSH3P25336 YDR464C-AYDR464C-A 189 nt4.19□□□□□ -1.74
MSH3P25336 YGR053CYGR053C 852 nt4.19□□□□□ -1.74
MSH3P25336 PDX1YGR193C 1233 nt4.19□□□□□ -1.74
MSH3P25336 GEP4YHR100C 558 nt4.19□□□□□ -1.74
MSH3P25336 PBA1YLR199C 831 nt4.19□□□□□ -1.74
MSH3P25336 HHF2YNL030W 312 nt4.19□□□□□ -1.74
MSH3P25336 ZEO1YOL109W 342 nt4.19□□□□□ -1.74
MSH3P25336 NSL1YPL233W 651 nt4.19□□□□□ -1.74
MSH3P25336 CHD1YER164W 4407 nt4.19□□□□□ -1.74
MSH3P25336 USA1YML029W 2517 nt4.19□□□□□ -1.74
MSH3P25336 SRP68YPL243W 1800 nt4.18□□□□□ -1.74
MSH3P25336 MUB1YMR100W 1863 nt4.18□□□□□ -1.74
MSH3P25336 YGL165CYGL165C 579 nt4.18□□□□□ -1.74
MSH3P25336 YGR242WYGR242W 309 nt4.18□□□□□ -1.74
MSH3P25336 YIL046W-AYIL046W-A 165 nt4.18□□□□□ -1.74
MSH3P25336 YMR316C-AYMR316C-A 312 nt4.18□□□□□ -1.74
MSH3P25336 LTP1YPR073C 486 nt4.18□□□□□ -1.74
MSH3P25336 ROY1YMR258C 1662 nt4.18□□□□□ -1.74
MSH3P25336 YBR259WYBR259W 2067 nt4.18□□□□□ -1.74
MSH3P25336 HEF3YNL014W 3135 nt4.18□□□□□ -1.74
MSH3P25336 NUP85YJR042W 2235 nt4.18□□□□□ -1.74
MSH3P25336 UTP13YLR222C 2454 nt4.17□□□□□ -1.74
MSH3P25336 SWT1YOR166C 1377 nt4.17□□□□□ -1.74
MSH3P25336 ICR1ICR1 3199 nt4.17□□□□□ -1.74
MSH3P25336 YER097WYER097W 330 nt4.17□□□□□ -1.74
MSH3P25336 YGL042CYGL042C 306 nt4.17□□□□□ -1.74
MSH3P25336 PEX17YNL214W 600 nt4.17□□□□□ -1.74
MSH3P25336 MRPL50YNR022C 420 nt4.17□□□□□ -1.74
MSH3P25336 OST2YOR103C 393 nt4.17□□□□□ -1.74
MSH3P25336 IDH2YOR136W 1110 nt4.17□□□□□ -1.74
MSH3P25336 TSC3YBR058C-A 243 nt4.17□□□□□ -1.74
MSH3P25336 YPR059CYPR059C 387 nt4.17□□□□□ -1.74
MSH3P25336 ISM1YPL040C 3009 nt4.17□□□□□ -1.74
MSH3P25336 SKN7YHR206W 1869 nt4.17□□□□□ -1.74
MSH3P25336 FAT1YBR041W 2010 nt4.17□□□□□ -1.74
MSH3P25336 SPT6YGR116W 4356 nt4.16□□□□□ -1.74
MSH3P25336 YLR352WYLR352W 2424 nt4.16□□□□□ -1.74
MSH3P25336 RNH70YGR276C 1662 nt4.16□□□□□ -1.74
MSH3P25336 AIM21YIR003W 2040 nt4.16□□□□□ -1.74
MSH3P25336 YDR442WYDR442W 393 nt4.16□□□□□ -1.74
MSH3P25336 CDC26YFR036W 375 nt4.16□□□□□ -1.74
MSH3P25336 SPT4YGR063C 309 nt4.16□□□□□ -1.74
MSH3P25336 PEX4YGR133W 552 nt4.16□□□□□ -1.74
MSH3P25336 LAG1YHL003C 1236 nt4.16□□□□□ -1.74
MSH3P25336 YIL054WYIL054W 318 nt4.16□□□□□ -1.74
MSH3P25336 YAL031W-AYAL031W-A 309 nt4.16□□□□□ -1.74
MSH3P25336 VTI1YMR197C 654 nt4.16□□□□□ -1.74
MSH3P25336 YMR294W-AYMR294W-A 360 nt4.16□□□□□ -1.74
MSH3P25336 CWH43YCR017C 2862 nt4.16□□□□□ -1.74
MSH3P25336 KIN4YOR233W 2403 nt4.16□□□□□ -1.74
MSH3P25336 MSH4YFL003C 2637 nt4.16□□□□□ -1.74
MSH3P25336 GPI1YGR216C 1830 nt4.16□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms