Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.69■■□□□ 1.7
COL11A2P13942 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 RCN1P1-201ENST00000400413 996 ntBASIC25.69■■□□□ 1.7
COL11A2P13942 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
COL11A2P13942 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
COL11A2P13942 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL11A2P13942 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.69■■□□□ 1.7
COL11A2P13942 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
COL11A2P13942 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.68■■□□□ 1.7
COL11A2P13942 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
COL11A2P13942 AC113410.3-201ENST00000623366 203 ntBASIC25.68■■□□□ 1.7
COL11A2P13942 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.68■■□□□ 1.7
COL11A2P13942 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
COL11A2P13942 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
COL11A2P13942 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.67■■□□□ 1.7
COL11A2P13942 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
COL11A2P13942 AC012306.2-201ENST00000609350 630 ntBASIC25.67■■□□□ 1.7
COL11A2P13942 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
COL11A2P13942 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
COL11A2P13942 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL11A2P13942 FAM99A-202ENST00000538190 1989 ntBASIC25.67■■□□□ 1.7
COL11A2P13942 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.66■■□□□ 1.7
COL11A2P13942 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.66■■□□□ 1.7
COL11A2P13942 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.66■■□□□ 1.7
COL11A2P13942 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.66■■□□□ 1.7
COL11A2P13942 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.66■■□□□ 1.7
COL11A2P13942 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL11A2P13942 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.66■■□□□ 1.7
COL11A2P13942 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
COL11A2P13942 TSPY15P-201ENST00000457163 923 ntBASIC25.66■■□□□ 1.7
COL11A2P13942 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
COL11A2P13942 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.65■■□□□ 1.7
COL11A2P13942 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC25.65■■□□□ 1.7
COL11A2P13942 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.65■■□□□ 1.7
COL11A2P13942 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.65■■□□□ 1.7
COL11A2P13942 REXO1L12P-201ENST00000622156 912 ntBASIC25.65■■□□□ 1.7
COL11A2P13942 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL11A2P13942 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.64■■□□□ 1.7
COL11A2P13942 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
COL11A2P13942 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.7
COL11A2P13942 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL11A2P13942 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A2P13942 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A2P13942 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A2P13942 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL11A2P13942 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
COL11A2P13942 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.63■■□□□ 1.69
COL11A2P13942 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.63■■□□□ 1.69
COL11A2P13942 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.63■■□□□ 1.69
COL11A2P13942 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms