Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
BMP4P12644 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 AP005435.1-201ENST00000529293 1178 ntBASIC18.91■□□□□ 0.62
BMP4P12644 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.91■□□□□ 0.62
BMP4P12644 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.91■□□□□ 0.62
BMP4P12644 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.91■□□□□ 0.62
BMP4P12644 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
BMP4P12644 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
BMP4P12644 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BMP4P12644 AC073314.1-201ENST00000568729 2216 ntBASIC18.9■□□□□ 0.62
BMP4P12644 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 MIR572-201ENST00000384983 95 ntBASIC18.9■□□□□ 0.62
BMP4P12644 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
BMP4P12644 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
BMP4P12644 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.9■□□□□ 0.62
BMP4P12644 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BMP4P12644 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.89■□□□□ 0.62
BMP4P12644 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BMP4P12644 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.89■□□□□ 0.61
BMP4P12644 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BMP4P12644 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BMP4P12644 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.89■□□□□ 0.61
BMP4P12644 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.89■□□□□ 0.61
BMP4P12644 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
BMP4P12644 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.89■□□□□ 0.61
BMP4P12644 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.89■□□□□ 0.61
BMP4P12644 YBX1P1-201ENST00000445822 960 ntBASIC18.89■□□□□ 0.61
BMP4P12644 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
BMP4P12644 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
BMP4P12644 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BMP4P12644 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BMP4P12644 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BMP4P12644 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.88■□□□□ 0.61
BMP4P12644 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 AC034268.1-201ENST00000441047 882 ntBASIC18.88■□□□□ 0.61
BMP4P12644 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.88■□□□□ 0.61
BMP4P12644 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 AC087623.3-201ENST00000607047 1098 ntBASIC18.88■□□□□ 0.61
BMP4P12644 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.88■□□□□ 0.61
BMP4P12644 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
BMP4P12644 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BMP4P12644 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BMP4P12644 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
BMP4P12644 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
BMP4P12644 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BMP4P12644 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms