Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 KRI1YNL308C 1776 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 MRP10YDL045W-A 288 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 RPC10YHR143W-A 213 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 HTB2YBL002W 396 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 PFY1YOR122C 381 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 MRPS16YPL013C 366 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 SRS2YJL092W 3525 nt4.89□□□□□ -1.63
TY1A-PR1P0CX58 ECM25YJL201W 1800 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 BUD5YCR038C 1929 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 RIP1YEL024W 648 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 YER188C-AYER188C-A 300 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 SHH3YMR118C 591 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 YMR122CYMR122C 375 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 SUI1YNL244C 327 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 snR10snR10 245 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 ATG12YBR217W 561 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 IRC3YDR332W 2070 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 ARG2YJL071W 1725 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 YKL222CYKL222C 2118 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 VPS41YDR080W 2979 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 CYK3YDL117W 2658 nt4.88□□□□□ -1.63
TY1A-PR1P0CX58 VAC14YLR386W 2643 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 OPT2YPR194C 2634 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 ERG7YHR072W 2196 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 PWP1YLR196W 1731 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 CDC26YFR036W 375 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 YJR140W-AYJR140W-A 150 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 YMR172C-AYMR172C-A 384 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 HOR7YMR251W-A 180 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 YOL085W-AYOL085W-A 213 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 MCP1YOR228C 909 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 YML082WYML082W 1950 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 EMP70YLR083C 2004 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 SMI1YGR229C 1518 nt4.87□□□□□ -1.63
TY1A-PR1P0CX58 REV1YOR346W 2958 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 TPS3YMR261C 3165 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 MSH4YFL003C 2637 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 DAD4YDR320C-A 219 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 YEL018C-AYEL018C-A 534 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 YEL068CYEL068C 333 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 BCD1YHR040W 1101 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 RPB11YOL005C 363 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 snR32snR32 188 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 SWD3YBR175W 948 nt4.86□□□□□ -1.63
TY1A-PR1P0CX58 YDR544CYDR544C 429 nt4.85□□□□□ -1.63
TY1A-PR1P0CX58 YOR072W-AYOR072W-A 249 nt4.85□□□□□ -1.63
TY1A-PR1P0CX58 ACC1YNR016C 6702 nt4.85□□□□□ -1.63
TY1A-PR1P0CX58 TRS85YDR108W 2097 nt4.84□□□□□ -1.63
TY1A-PR1P0CX58 RPS26BYER131W 360 nt4.84□□□□□ -1.63
TY1A-PR1P0CX58 RPL29YFR032C-A 180 nt4.84□□□□□ -1.63
TY1A-PR1P0CX58 YLR053CYLR053C 327 nt4.84□□□□□ -1.63
TY1A-PR1P0CX58 YPR076WYPR076W 375 nt4.84□□□□□ -1.63
TY1A-PR1P0CX58 YDR109CYDR109C 2148 nt4.84□□□□□ -1.64
TY1A-PR1P0CX58 KRS1YDR037W 1776 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 SYG1YIL047C 2709 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 NAN1YPL126W 2691 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 ARF1YDL192W 546 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 CYB5YNL111C 363 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 RPL36BYPL249C-A 303 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 LRE1YCL051W 1752 nt4.83□□□□□ -1.64
TY1A-PR1P0CX58 MCX1YBR227C 1563 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 MRK1YDL079C 1506 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 COX18YGR062C 951 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 LSM2YBL026W 288 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 EGD1YPL037C 474 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 YBR259WYBR259W 2067 nt4.82□□□□□ -1.64
TY1A-PR1P0CX58 HUL4YJR036C 2679 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 PBS2YJL128C 2007 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 YDL011CYDL011C 324 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 SDH4YDR178W 546 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 RPL14BYHL001W 417 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 ATG33YLR356W 594 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 BEM4YPL161C 1902 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 RAD53YPL153C 2466 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 TDA1YMR291W 1761 nt4.81□□□□□ -1.64
TY1A-PR1P0CX58 PUT2YHR037W 1728 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 DAL81YIR023W 2913 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 SYF1YDR416W 2580 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 PRO3YER023W 861 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 YKR033CYKR033C 426 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 YPL025CYPL025C 558 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 LTP1YPR073C 486 nt4.8□□□□□ -1.64
TY1A-PR1P0CX58 SIN4YNL236W 2925 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 MDM32YOR147W 1869 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 UTP4YDR324C 2331 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 DNM1YLL001W 2274 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 CUL3YGR003W 2235 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 MET12YPL023C 1974 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 YGR176WYGR176W 348 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 PEX11YOL147C 711 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 TRM7YBR061C 933 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 YRF1-4YLR466W 4149 nt4.79□□□□□ -1.64
TY1A-PR1P0CX58 MBP1YDL056W 2502 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 OAF1YAL051W 3144 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 YEL053W-AYEL053W-A 348 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 YNL057WYNL057W 333 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 APL6YGR261C 2430 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 YCR023CYCR023C 1836 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 AIP1YMR092C 1848 nt4.78□□□□□ -1.64
TY1A-PR1P0CX58 NHX1YDR456W 1902 nt4.78□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms