Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ITM2C-210ENST00000620962 501 ntBASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40ALP0C0E4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40ALP0C0E4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 C11orf96-202ENST00000528572 1834 ntBASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40ALP0C0E4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40ALP0C0E4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 KRT18P29-201ENST00000397031 1267 ntBASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 CYP2T3P-201ENST00000601990 817 ntBASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 AC066615.1-201ENST00000640911 628 ntBASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40ALP0C0E4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB40ALP0C0E4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms