Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
FREM3P0C091 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.88■□□□□ 0.61
FREM3P0C091 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.88■□□□□ 0.61
FREM3P0C091 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
FREM3P0C091 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
FREM3P0C091 AL355472.2-201ENST00000422958 438 ntBASIC18.88■□□□□ 0.61
FREM3P0C091 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.88■□□□□ 0.61
FREM3P0C091 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.88■□□□□ 0.61
FREM3P0C091 AC083906.2-201ENST00000511578 360 ntBASIC18.88■□□□□ 0.61
FREM3P0C091 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.88■□□□□ 0.61
FREM3P0C091 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.87■□□□□ 0.61
FREM3P0C091 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.87■□□□□ 0.61
FREM3P0C091 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FREM3P0C091 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.87■□□□□ 0.61
FREM3P0C091 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
FREM3P0C091 AL138781.1-201ENST00000566567 1274 ntBASIC18.87■□□□□ 0.61
FREM3P0C091 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
FREM3P0C091 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
FREM3P0C091 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
FREM3P0C091 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
FREM3P0C091 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FREM3P0C091 AC243732.1-201ENST00000612648 864 ntBASIC18.86■□□□□ 0.61
FREM3P0C091 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.86■□□□□ 0.61
FREM3P0C091 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.86■□□□□ 0.61
FREM3P0C091 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FREM3P0C091 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.86■□□□□ 0.61
FREM3P0C091 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 FEM1AP4-201ENST00000443167 1987 ntBASIC18.86■□□□□ 0.61
FREM3P0C091 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.86■□□□□ 0.61
FREM3P0C091 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.86■□□□□ 0.61
FREM3P0C091 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.86■□□□□ 0.61
FREM3P0C091 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.86■□□□□ 0.61
FREM3P0C091 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.86■□□□□ 0.61
FREM3P0C091 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FREM3P0C091 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FREM3P0C091 AC005229.4-201ENST00000610085 2198 ntBASIC18.85■□□□□ 0.61
FREM3P0C091 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 AC091799.1-201ENST00000422823 811 ntBASIC18.85■□□□□ 0.61
FREM3P0C091 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
FREM3P0C091 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 AL121832.2-201ENST00000610979 668 ntBASIC18.85■□□□□ 0.61
FREM3P0C091 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
FREM3P0C091 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FREM3P0C091 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.84■□□□□ 0.61
FREM3P0C091 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FREM3P0C091 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.84■□□□□ 0.61
FREM3P0C091 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.84■□□□□ 0.61
FREM3P0C091 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FREM3P0C091 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FREM3P0C091 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
FREM3P0C091 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FREM3P0C091 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.83■□□□□ 0.61
FREM3P0C091 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.83■□□□□ 0.61
FREM3P0C091 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.83■□□□□ 0.61
FREM3P0C091 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.83■□□□□ 0.61
FREM3P0C091 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms