Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 YKL222CYKL222C 2118 nt3.7□□□□□ -1.82
SRD1P09007 DFG10YIL049W 762 nt3.7□□□□□ -1.82
SRD1P09007 LSM1YJL124C 519 nt3.7□□□□□ -1.82
SRD1P09007 SDH3YKL141W 597 nt3.7□□□□□ -1.82
SRD1P09007 DDR48YMR173W 1293 nt3.7□□□□□ -1.82
SRD1P09007 LEE1YPL054W 906 nt3.7□□□□□ -1.82
SRD1P09007 snR54snR54 86 nt3.7□□□□□ -1.82
SRD1P09007 MUD2YKL074C 1584 nt3.7□□□□□ -1.82
SRD1P09007 GRS2YPR081C 1857 nt3.7□□□□□ -1.82
SRD1P09007 DAN4YJR151C 3486 nt3.7□□□□□ -1.82
SRD1P09007 MSR1YHR091C 1932 nt3.7□□□□□ -1.82
SRD1P09007 MDN1YLR106C 14733 nt3.69□□□□□ -1.82
SRD1P09007 GYL1YMR192W 2163 nt3.69□□□□□ -1.82
SRD1P09007 YKR078WYKR078W 1758 nt3.69□□□□□ -1.82
SRD1P09007 KRI1YNL308C 1776 nt3.69□□□□□ -1.82
SRD1P09007 SSF2YDR312W 1362 nt3.69□□□□□ -1.82
SRD1P09007 YGR242WYGR242W 309 nt3.69□□□□□ -1.82
SRD1P09007 IES3YLR052W 753 nt3.69□□□□□ -1.82
SRD1P09007 YML108WYML108W 318 nt3.69□□□□□ -1.82
SRD1P09007 RRT16YNL105W 429 nt3.69□□□□□ -1.82
SRD1P09007 VID24YBR105C 1089 nt3.69□□□□□ -1.82
SRD1P09007 SSM4YIL030C 3960 nt3.69□□□□□ -1.82
SRD1P09007 PAM1YDR251W 2493 nt3.69□□□□□ -1.82
SRD1P09007 SSP1YHR184W 1716 nt3.69□□□□□ -1.82
SRD1P09007 URA2YJL130C 6645 nt3.69□□□□□ -1.82
SRD1P09007 JJJ2YJL162C 1752 nt3.68□□□□□ -1.82
SRD1P09007 PBS2YJL128C 2007 nt3.68□□□□□ -1.82
SRD1P09007 KHA1YJL094C 2622 nt3.68□□□□□ -1.82
SRD1P09007 PAU10YDR542W 363 nt3.68□□□□□ -1.82
SRD1P09007 HUR1YGL168W 333 nt3.68□□□□□ -1.82
SRD1P09007 PAU11YGL261C 363 nt3.68□□□□□ -1.82
SRD1P09007 IRC9YJL142C 393 nt3.68□□□□□ -1.82
SRD1P09007 PAU4YLR461W 363 nt3.68□□□□□ -1.82
SRD1P09007 RSM19YNR037C 276 nt3.68□□□□□ -1.82
SRD1P09007 YOL085W-AYOL085W-A 213 nt3.68□□□□□ -1.82
SRD1P09007 OST2YOR103C 393 nt3.68□□□□□ -1.82
SRD1P09007 YPR108W-AYPR108W-A 213 nt3.68□□□□□ -1.82
SRD1P09007 STP2YHR006W 1626 nt3.68□□□□□ -1.82
SRD1P09007 YGR027W-BYGR027W-B 5268 nt3.68□□□□□ -1.82
SRD1P09007 YLR227W-BYLR227W-B 5268 nt3.68□□□□□ -1.82
SRD1P09007 YPR158C-DYPR158C-D 5268 nt3.68□□□□□ -1.82
SRD1P09007 URB2YJR041C 3525 nt3.67□□□□□ -1.82
SRD1P09007 ECO1YFR027W 846 nt3.67□□□□□ -1.82
SRD1P09007 SPC1YJR010C-A 285 nt3.67□□□□□ -1.82
SRD1P09007 AIM29YKR074W 468 nt3.67□□□□□ -1.82
SRD1P09007 SRL3YKR091W 741 nt3.67□□□□□ -1.82
SRD1P09007 HRI1YLR301W 735 nt3.67□□□□□ -1.82
SRD1P09007 ALG14YBR070C 714 nt3.67□□□□□ -1.82
SRD1P09007 TRK1YJL129C 3708 nt3.67□□□□□ -1.82
SRD1P09007 NUP60YAR002W 1620 nt3.66□□□□□ -1.82
SRD1P09007 AHC2YCR082W 387 nt3.66□□□□□ -1.82
SRD1P09007 YCR090CYCR090C 549 nt3.66□□□□□ -1.82
SRD1P09007 YDR193WYDR193W 399 nt3.66□□□□□ -1.82
SRD1P09007 YER091C-AYER091C-A 222 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)DtK(UUU)D 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)G1tK(UUU)G1 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)G2tK(UUU)G2 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)KtK(UUU)K 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)LtK(UUU)L 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)OtK(UUU)O 73 nt3.66□□□□□ -1.82
SRD1P09007 tK(UUU)PtK(UUU)P 73 nt3.66□□□□□ -1.82
SRD1P09007 ERV1YGR029W 570 nt3.66□□□□□ -1.82
SRD1P09007 CMS1YLR003C 876 nt3.66□□□□□ -1.82
SRD1P09007 YCG1YDR325W 3108 nt3.66□□□□□ -1.82
SRD1P09007 GDI1YER136W 1356 nt3.65□□□□□ -1.82
SRD1P09007 VBA4YDR119W 2307 nt3.65□□□□□ -1.82
SRD1P09007 REG1YDR028C 3045 nt3.65□□□□□ -1.83
SRD1P09007 OTU2YHL013C 924 nt3.65□□□□□ -1.83
SRD1P09007 GEP4YHR100C 558 nt3.65□□□□□ -1.83
SRD1P09007 YER006C-AYER006C-A 318 nt3.64□□□□□ -1.83
SRD1P09007 RPB9YGL070C 369 nt3.64□□□□□ -1.83
SRD1P09007 PDX1YGR193C 1233 nt3.64□□□□□ -1.83
SRD1P09007 MCR1YKL150W 909 nt3.64□□□□□ -1.83
SRD1P09007 ARV1YLR242C 966 nt3.64□□□□□ -1.83
SRD1P09007 RPL19BYBL027W 570 nt3.64□□□□□ -1.83
SRD1P09007 HHF2YNL030W 312 nt3.64□□□□□ -1.83
SRD1P09007 NOP15YNL110C 663 nt3.64□□□□□ -1.83
SRD1P09007 YNL146C-AYNL146C-A 195 nt3.64□□□□□ -1.83
SRD1P09007 PFY1YOR122C 381 nt3.64□□□□□ -1.83
SRD1P09007 MNL1YHR204W 2391 nt3.64□□□□□ -1.83
SRD1P09007 LCB4YOR171C 1875 nt3.64□□□□□ -1.83
SRD1P09007 SLP1YOR154W 1764 nt3.63□□□□□ -1.83
SRD1P09007 EMP70YLR083C 2004 nt3.63□□□□□ -1.83
SRD1P09007 SKN7YHR206W 1869 nt3.63□□□□□ -1.83
SRD1P09007 RPS26BYER131W 360 nt3.63□□□□□ -1.83
SRD1P09007 PET54YGR222W 882 nt3.63□□□□□ -1.83
SRD1P09007 YKL068W-AYKL068W-A 237 nt3.63□□□□□ -1.83
SRD1P09007 YLR101CYLR101C 396 nt3.63□□□□□ -1.83
SRD1P09007 RRD2YPL152W 1077 nt3.63□□□□□ -1.83
SRD1P09007 RPS23BYPR132W 438 nt3.63□□□□□ -1.83
SRD1P09007 RAD5YLR032W 3510 nt3.63□□□□□ -1.83
SRD1P09007 MSH2YOL090W 2895 nt3.63□□□□□ -1.83
SRD1P09007 CDC55YGL190C 1581 nt3.63□□□□□ -1.83
SRD1P09007 MNT3YIL014W 1893 nt3.62□□□□□ -1.83
SRD1P09007 YGL042CYGL042C 306 nt3.62□□□□□ -1.83
SRD1P09007 YPR077CYPR077C 372 nt3.62□□□□□ -1.83
SRD1P09007 YCK2YNL154C 1641 nt3.62□□□□□ -1.83
SRD1P09007 RAD26YJR035W 3258 nt3.62□□□□□ -1.83
SRD1P09007 RPA135YPR010C 3612 nt3.62□□□□□ -1.83
SRD1P09007 VAC8YEL013W 1737 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms