Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHRNA1P02708 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.69■■□□□ 1.22
CHRNA1P02708 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CHRNA1P02708 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.69■■□□□ 1.22
CHRNA1P02708 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.69■■□□□ 1.22
CHRNA1P02708 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CHRNA1P02708 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.69■■□□□ 1.22
CHRNA1P02708 AL596275.1-201ENST00000423464 877 ntBASIC22.69■■□□□ 1.22
CHRNA1P02708 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CHRNA1P02708 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.69■■□□□ 1.22
CHRNA1P02708 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.69■■□□□ 1.22
CHRNA1P02708 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHRNA1P02708 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.69■■□□□ 1.22
CHRNA1P02708 AC242852.2-201ENST00000615738 1807 ntBASIC22.68■■□□□ 1.22
CHRNA1P02708 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 AC092368.3-202ENST00000574180 1591 ntBASIC22.68■■□□□ 1.22
CHRNA1P02708 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CHRNA1P02708 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.68■■□□□ 1.22
CHRNA1P02708 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.68■■□□□ 1.22
CHRNA1P02708 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.68■■□□□ 1.22
CHRNA1P02708 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.68■■□□□ 1.22
CHRNA1P02708 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.68■■□□□ 1.22
CHRNA1P02708 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.68■■□□□ 1.22
CHRNA1P02708 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHRNA1P02708 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CHRNA1P02708 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.67■■□□□ 1.22
CHRNA1P02708 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.67■■□□□ 1.22
CHRNA1P02708 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHRNA1P02708 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 RPS2P4-201ENST00000476944 856 ntBASIC22.67■■□□□ 1.22
CHRNA1P02708 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 AL359736.2-201ENST00000621992 437 ntBASIC22.67■■□□□ 1.22
CHRNA1P02708 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CHRNA1P02708 AC116050.2-201ENST00000612102 1779 ntBASIC22.67■■□□□ 1.22
CHRNA1P02708 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.67■■□□□ 1.22
CHRNA1P02708 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.67■■□□□ 1.22
CHRNA1P02708 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHRNA1P02708 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CHRNA1P02708 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
CHRNA1P02708 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CHRNA1P02708 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.66■■□□□ 1.22
CHRNA1P02708 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.66■■□□□ 1.22
CHRNA1P02708 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.66■■□□□ 1.22
CHRNA1P02708 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.66■■□□□ 1.22
CHRNA1P02708 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
CHRNA1P02708 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHRNA1P02708 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CHRNA1P02708 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.65■■□□□ 1.22
CHRNA1P02708 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.65■■□□□ 1.22
CHRNA1P02708 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.65■■□□□ 1.22
CHRNA1P02708 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.65■■□□□ 1.22
CHRNA1P02708 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.65■■□□□ 1.22
CHRNA1P02708 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CHRNA1P02708 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.65■■□□□ 1.22
CHRNA1P02708 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.65■■□□□ 1.22
CHRNA1P02708 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.65■■□□□ 1.22
CHRNA1P02708 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHRNA1P02708 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.65■■□□□ 1.22
CHRNA1P02708 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHRNA1P02708 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
CHRNA1P02708 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHRNA1P02708 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.64■■□□□ 1.21
CHRNA1P02708 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.64■■□□□ 1.21
CHRNA1P02708 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.64■■□□□ 1.21
CHRNA1P02708 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.64■■□□□ 1.21
CHRNA1P02708 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.64■■□□□ 1.21
CHRNA1P02708 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.64■■□□□ 1.21
CHRNA1P02708 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.64■■□□□ 1.21
CHRNA1P02708 AC105020.6-201ENST00000621523 1217 ntBASIC22.64■■□□□ 1.21
CHRNA1P02708 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms