Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DRAP01903 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DRAP01903 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 AC121338.2-201ENST00000622535 1744 ntBASIC22.32■■□□□ 1.16
HLA-DRAP01903 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DRAP01903 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DRAP01903 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DRAP01903 AL137784.2-201ENST00000607332 1000 ntBASIC22.32■■□□□ 1.16
HLA-DRAP01903 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.32■■□□□ 1.16
HLA-DRAP01903 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
HLA-DRAP01903 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 PLK5-205ENST00000642079 1969 ntBASIC22.31■■□□□ 1.16
HLA-DRAP01903 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
HLA-DRAP01903 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.31■■□□□ 1.16
HLA-DRAP01903 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HLA-DRAP01903 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.31■■□□□ 1.16
HLA-DRAP01903 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.31■■□□□ 1.16
HLA-DRAP01903 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 PKD1P6-201ENST00000343738 4769 ntBASIC22.31■■□□□ 1.16
HLA-DRAP01903 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HLA-DRAP01903 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DRAP01903 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.3■■□□□ 1.16
HLA-DRAP01903 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 CNN2P6-201ENST00000439038 900 ntBASIC22.29■■□□□ 1.16
HLA-DRAP01903 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 AC013268.1-206ENST00000638368 961 ntBASIC22.29■■□□□ 1.16
HLA-DRAP01903 AC112229.1-201ENST00000639295 961 ntBASIC22.29■■□□□ 1.16
HLA-DRAP01903 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DRAP01903 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
HLA-DRAP01903 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DRAP01903 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DRAP01903 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HLA-DRAP01903 AC092666.2-201ENST00000613287 246 ntBASIC22.28■■□□□ 1.16
HLA-DRAP01903 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DRAP01903 AC011484.1-201ENST00000377652 1995 ntBASIC22.28■■□□□ 1.16
HLA-DRAP01903 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.27■■□□□ 1.16
HLA-DRAP01903 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
HLA-DRAP01903 AC007322.4-201ENST00000509611 723 ntBASIC22.27■■□□□ 1.16
HLA-DRAP01903 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 AC080038.1-201ENST00000611274 1154 ntBASIC22.27■■□□□ 1.16
HLA-DRAP01903 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.27■■□□□ 1.16
HLA-DRAP01903 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.27■■□□□ 1.16
HLA-DRAP01903 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DRAP01903 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HLA-DRAP01903 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms