Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TSPAN3O60637 MIPEPP3-201ENST00000412105 444 ntBASIC21.39■■□□□ 1.01
TSPAN3O60637 AL162412.1-201ENST00000567129 965 ntBASIC21.39■■□□□ 1.01
TSPAN3O60637 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.39■■□□□ 1.01
TSPAN3O60637 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.39■■□□□ 1.01
TSPAN3O60637 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 PKD1P6-201ENST00000343738 4769 ntBASIC21.39■■□□□ 1.01
TSPAN3O60637 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TSPAN3O60637 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
TSPAN3O60637 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
TSPAN3O60637 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.38■■□□□ 1.01
TSPAN3O60637 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TSPAN3O60637 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.38■■□□□ 1.01
TSPAN3O60637 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.38■■□□□ 1.01
TSPAN3O60637 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
TSPAN3O60637 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
TSPAN3O60637 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 AL512625.2-201ENST00000417533 625 ntBASIC21.38■■□□□ 1.01
TSPAN3O60637 BX276092.2-201ENST00000417668 665 ntBASIC21.38■■□□□ 1.01
TSPAN3O60637 CDV3P1-201ENST00000471403 739 ntBASIC21.38■■□□□ 1.01
TSPAN3O60637 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.38■■□□□ 1.01
TSPAN3O60637 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TSPAN3O60637 AC010980.2-201ENST00000587099 1412 ntBASIC21.38■■□□□ 1.01
TSPAN3O60637 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.37■■□□□ 1.01
TSPAN3O60637 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
TSPAN3O60637 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN3O60637 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.37■■□□□ 1.01
TSPAN3O60637 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN3O60637 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN3O60637 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.37■■□□□ 1.01
TSPAN3O60637 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 Z98882.1-201ENST00000622160 2253 ntBASIC21.37■■□□□ 1.01
TSPAN3O60637 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.37■■□□□ 1.01
TSPAN3O60637 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TSPAN3O60637 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TSPAN3O60637 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.37■■□□□ 1.01
TSPAN3O60637 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TSPAN3O60637 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.36■■□□□ 1.01
TSPAN3O60637 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.36■■□□□ 1.01
TSPAN3O60637 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TSPAN3O60637 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TSPAN3O60637 AC079834.2-201ENST00000609776 1949 ntBASIC21.36■■□□□ 1.01
TSPAN3O60637 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TSPAN3O60637 AL355472.2-201ENST00000422958 438 ntBASIC21.36■■□□□ 1.01
TSPAN3O60637 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.36■■□□□ 1.01
TSPAN3O60637 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.36■■□□□ 1.01
TSPAN3O60637 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.36■■□□□ 1.01
TSPAN3O60637 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TSPAN3O60637 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TSPAN3O60637 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.36■■□□□ 1.01
TSPAN3O60637 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TSPAN3O60637 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TSPAN3O60637 LINC00565-201ENST00000562710 2331 ntBASIC21.35■■□□□ 1.01
TSPAN3O60637 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TSPAN3O60637 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.35■■□□□ 1.01
TSPAN3O60637 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.35■■□□□ 1.01
TSPAN3O60637 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.35■■□□□ 1.01
TSPAN3O60637 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.35■■□□□ 1.01
TSPAN3O60637 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.35■■□□□ 1.01
TSPAN3O60637 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TSPAN3O60637 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.35■■□□□ 1.01
TSPAN3O60637 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms