Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNPHO15079 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 AC004854.2-201ENST00000608450 1441 ntBASIC19.46■□□□□ 0.71
SNPHO15079 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNPHO15079 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.46■□□□□ 0.71
SNPHO15079 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.46■□□□□ 0.71
SNPHO15079 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.46■□□□□ 0.71
SNPHO15079 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.46■□□□□ 0.71
SNPHO15079 KRT18P61-201ENST00000585825 1298 ntBASIC19.46■□□□□ 0.71
SNPHO15079 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.46■□□□□ 0.71
SNPHO15079 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.46■□□□□ 0.71
SNPHO15079 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SNPHO15079 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.46■□□□□ 0.71
SNPHO15079 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SNPHO15079 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
SNPHO15079 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.46■□□□□ 0.71
SNPHO15079 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNPHO15079 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNPHO15079 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNPHO15079 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNPHO15079 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNPHO15079 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNPHO15079 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
SNPHO15079 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.44■□□□□ 0.7
SNPHO15079 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
SNPHO15079 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.44■□□□□ 0.7
SNPHO15079 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 LINC01521-201ENST00000504184 1943 ntBASIC19.44■□□□□ 0.7
SNPHO15079 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNPHO15079 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SNPHO15079 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.44■□□□□ 0.7
SNPHO15079 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SNPHO15079 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNPHO15079 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNPHO15079 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNPHO15079 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.43■□□□□ 0.7
SNPHO15079 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.43■□□□□ 0.7
SNPHO15079 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.43■□□□□ 0.7
SNPHO15079 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.43■□□□□ 0.7
SNPHO15079 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.43■□□□□ 0.7
SNPHO15079 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.43■□□□□ 0.7
SNPHO15079 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
SNPHO15079 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNPHO15079 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNPHO15079 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.43■□□□□ 0.7
SNPHO15079 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
SNPHO15079 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNPHO15079 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SNPHO15079 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SNPHO15079 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SNPHO15079 SERPINA7P1-201ENST00000443077 631 ntBASIC19.42■□□□□ 0.7
SNPHO15079 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.42■□□□□ 0.7
SNPHO15079 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.42■□□□□ 0.7
SNPHO15079 MTND2P7-201ENST00000521337 640 ntBASIC19.42■□□□□ 0.7
SNPHO15079 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.42■□□□□ 0.7
SNPHO15079 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.42■□□□□ 0.7
SNPHO15079 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.42■□□□□ 0.7
SNPHO15079 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNPHO15079 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms