Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMX3A6NHT5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMX3A6NHT5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HMX3A6NHT5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HMX3A6NHT5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.94■□□□□ 0.46
HMX3A6NHT5 AL162377.1-201ENST00000618844 1793 ntBASIC17.94■□□□□ 0.46
HMX3A6NHT5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.93■□□□□ 0.46
HMX3A6NHT5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.93■□□□□ 0.46
HMX3A6NHT5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 SNX5-217ENST00000606557 1087 ntBASIC17.93■□□□□ 0.46
HMX3A6NHT5 AC026471.6-201ENST00000622954 1905 ntBASIC17.93■□□□□ 0.46
HMX3A6NHT5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HMX3A6NHT5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
HMX3A6NHT5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.93■□□□□ 0.46
HMX3A6NHT5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HMX3A6NHT5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 RARRES2P1-201ENST00000474487 481 ntBASIC17.92■□□□□ 0.46
HMX3A6NHT5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.92■□□□□ 0.46
HMX3A6NHT5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMX3A6NHT5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.91■□□□□ 0.46
HMX3A6NHT5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMX3A6NHT5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 BX664725.1-201ENST00000438252 379 ntBASIC17.9■□□□□ 0.46
HMX3A6NHT5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMX3A6NHT5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMX3A6NHT5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMX3A6NHT5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.89■□□□□ 0.46
HMX3A6NHT5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMX3A6NHT5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms