Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRABD2BA6NFA1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 AC233263.1-201ENST00000578059 224 ntBASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRABD2BA6NFA1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 AC092368.3-202ENST00000574180 1591 ntBASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRABD2BA6NFA1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRABD2BA6NFA1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 KRT17P2-201ENST00000300992 1314 ntBASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRABD2BA6NFA1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 AC100791.3-201ENST00000617619 330 ntBASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 AC061975.6-201ENST00000579045 1553 ntBASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRABD2BA6NFA1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms