Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.62□□□□□ -0.07
TRBV6-4A0A1B0GX49 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 KRT18P14-201ENST00000534205 1250 ntBASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 CCDC92B-201ENST00000575506 885 ntBASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC104187.1-201ENST00000607510 612 ntBASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRBV6-4A0A1B0GX49 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 AP001160.3-201ENST00000601484 763 ntBASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRBV6-4A0A1B0GX49 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 LINC01521-201ENST00000504184 1943 ntBASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRBV6-4A0A1B0GX49 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.58□□□□□ -0.07
TRBV6-4A0A1B0GX49 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRBV6-4A0A1B0GX49 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms