Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV25A0A0B4J276 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 AC006970.2-201ENST00000450065 779 ntBASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 FAM21FP-204ENST00000608637 956 ntBASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 OR10C1-204ENST00000622521 1039 ntBASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 AC068338.2-201ENST00000563278 1430 ntBASIC15.59■□□□□ 0.09
TRAV25A0A0B4J276 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV25A0A0B4J276 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AC007322.3-201ENST00000426526 701 ntBASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AC090192.1-201ENST00000517740 490 ntBASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AC133552.2-202ENST00000575694 574 ntBASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV25A0A0B4J276 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 LINC00565-201ENST00000562710 2331 ntBASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 AC116050.2-201ENST00000612102 1779 ntBASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 CLDN5-201ENST00000403084 2357 ntBASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV25A0A0B4J276 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV25A0A0B4J276 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms