Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC021028.1-201ENST00000417559 598 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 COL4A2-AS1-201ENST00000417970 540 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 PHKA1-AS1-201ENST00000420998 598 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC017053.1-201ENST00000425125 579 ntTSL 4 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC005105.1-201ENST00000454851 792 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 COX17-203ENST00000484810 471 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC055748.1-201ENST00000489836 959 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 RACK1-225ENST00000511566 825 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC087664.3-201ENST00000524110 328 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 HNRNPA1P76-201ENST00000529475 848 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 DAD1-204ENST00000538631 441 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 C1RL-211ENST00000545280 449 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 APOC1-201ENST00000586638 425 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 APOC1-205ENST00000589781 273 ntTSL 3 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC004004.1-201ENST00000603784 250 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC073352.1-201ENST00000609598 504 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 CU633906.4-201ENST00000624484 1023 ntBASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 GRXCR2-202ENST00000639411 837 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 IL4R-201ENST00000170630 3380 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 CTH-203ENST00000411986 2044 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NPY5R-201ENST00000338566 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NBPF12-201ENST00000439206 1831 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NBPF26-203ENST00000611702 1831 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 NBPF14-204ENST00000611826 1831 ntTSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 AC021087.3-201ENST00000565521 2881 ntTSL 2 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 FUT10-201ENST00000327671 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 LPAR3-202ENST00000440886 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
NPIPA3F8WFD2 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 XIAPP2-201ENST00000527404 1852 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 SLC38A7-206ENST00000564100 2867 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 LINC01662-202ENST00000611876 1559 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 SNAP25-AS1-207ENST00000603542 3207 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 NPSR1-204ENST00000381542 1369 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ABCF1-201ENST00000326195 3481 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 HSH2D-208ENST00000616645 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CSF3R-205ENST00000373106 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ASB15-202ENST00000434204 2817 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 HSPB3-201ENST00000302005 784 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 TAC4-202ENST00000334568 675 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 RN7SKP194-201ENST00000411328 351 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 KIRREL1-IT1-201ENST00000419415 587 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 BX276092.7-201ENST00000433410 623 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AL359979.1-201ENST00000446145 487 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AL033384.2-201ENST00000474641 456 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC084125.3-201ENST00000529377 398 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 FLJ21408-202ENST00000565060 565 ntTSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ULK4P2-205ENST00000570221 634 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ALOX12-AS1-207ENST00000574377 886 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC025278.2-201ENST00000598153 1063 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 LYPLA2P2-201ENST00000600506 676 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC010615.4-201ENST00000600810 472 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC004466.3-201ENST00000615576 546 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CCL4L2-219ENST00000620732 856 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 U1.30-201ENST00000622285 165 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC073255.1-201ENST00000624149 177 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC245166.3-201ENST00000636897 257 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 AC079193.2-201ENST00000513892 2292 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 L3MBTL2-201ENST00000216237 3296 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 HACL1-207ENST00000451445 1734 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ZNF397-203ENST00000355632 2162 ntTSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CATSPERG-204ENST00000410018 3626 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 DAPK2-201ENST00000261891 2603 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 CCT5P2-201ENST00000432974 1624 ntBASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 ZNF565-202ENST00000355114 2519 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 BCL2L13-203ENST00000355028 4458 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 PALB2-201ENST00000261584 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
NPIPA3F8WFD2 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms