Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP000350.7-201ENST00000624923 8030 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AGK-203ENST00000473247 1550 ntTSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 B3GALNT1-201ENST00000320474 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AMPH-201ENST00000325590 3145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 NLGN4X-208ENST00000538097 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 ADGRG2-204ENST00000357544 4678 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 PFKM-203ENST00000359794 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 KRTAP4-1-201ENST00000398472 1241 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 PHKA1P1-201ENST00000420457 621 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC245060.3-201ENST00000432623 1242 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 RN7SL415P-201ENST00000490790 289 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC117482.1-201ENST00000490933 911 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 IL18-202ENST00000524595 1090 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 OR4D7P-201ENST00000534196 942 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC132938.1-201ENST00000566971 360 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 MT1E-203ENST00000568293 332 ntTSL 2 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL590084.3-201ENST00000573276 337 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 APOC1-201ENST00000586638 425 ntTSL 3 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 APOC1-205ENST00000589781 273 ntTSL 3 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC006557.1-201ENST00000591211 1085 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC119396.2-201ENST00000596946 363 ntTSL 3 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC099343.2-201ENST00000605082 686 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL359198.1-201ENST00000610263 571 ntTSL 3 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 LYZL6-201ENST00000615905 1047 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 COA6-204ENST00000619305 697 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC005786.4-201ENST00000623369 682 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC007241.1-201ENST00000634531 933 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 KCTD21-AS1-201ENST00000500113 1789 ntTSL 2 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL513534.1-201ENST00000562082 2295 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AC079331.2-201ENST00000623462 2546 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL139424.3-203ENST00000641117 1392 ntBASIC9.08□□□□□ -0.96
SNX18Q96RF0 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC9.08□□□□□ -0.96
SNX18Q96RF0 CCL22-201ENST00000219235 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SNX18Q96RF0 AL590132.1-201ENST00000639602 4455 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 ISX-201ENST00000308700 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC005722.2-201ENST00000577087 3370 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC017007.2-201ENST00000504528 1301 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AQP9-203ENST00000558772 1334 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 USP17L10-202ENST00000421288 1677 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 LINC02280-201ENST00000564585 3816 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 MRPL30-201ENST00000338148 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AL512638.2-201ENST00000425449 2610 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 LINC00968-201ENST00000499425 2366 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 OR5D14-201ENST00000335605 945 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 MIRLET7E-201ENST00000362102 79 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 MIR636-201ENST00000384825 99 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 B3GALNT2P1-201ENST00000404344 1295 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 GUSBP4-201ENST00000423899 672 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC093142.1-201ENST00000436725 349 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 FXYD6P2-201ENST00000444174 288 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 LINC00582-201ENST00000448058 597 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 HNRNPA1P57-202ENST00000452488 958 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 RUVBL1-AS1-201ENST00000485218 588 ntTSL 4 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 TRMT112P1-201ENST00000505515 351 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC090630.1-201ENST00000550874 499 ntTSL 3 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AL133167.1-201ENST00000554889 806 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 OR4Q1P-201ENST00000557009 904 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC023300.1-201ENST00000562561 382 ntTSL 3 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 MIR3131-201ENST00000583592 63 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 SNORD3A-201ENST00000584923 699 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC010642.1-201ENST00000594522 1213 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 ZNF880-205ENST00000597976 491 ntTSL 2 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC244517.2-201ENST00000607216 587 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SNX18Q96RF0 MDS2-203ENST00000612756 420 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC097478.3-201ENST00000620420 872 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC092135.2-201ENST00000624702 506 ntBASIC9.07□□□□□ -0.96
SNX18Q96RF0 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 AC245369.4-201ENST00000632209 353 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SNX18Q96RF0 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms