Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HLA-DRB4X5D2U9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 KRT18P14-201ENST00000534205 1250 ntBASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HLA-DRB4X5D2U9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
HLA-DRB4X5D2U9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DRB4X5D2U9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.58■□□□□ 0.09
HLA-DRB4X5D2U9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
HLA-DRB4X5D2U9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRB4X5D2U9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRB4X5D2U9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 AC007952.6-201ENST00000573168 2673 ntBASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 AC003957.1-201ENST00000625108 2673 ntBASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRB4X5D2U9 AC097381.1-201ENST00000429019 1296 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms