Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MYCNOS-205ENST00000641950 531 ntBASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLCA3PQ9Y6N3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLCA3PQ9Y6N3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 AC011767.1-201ENST00000617410 1153 ntBASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.59■□□□□ 0.73
CLCA3PQ9Y6N3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLCA3PQ9Y6N3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCA3PQ9Y6N3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCA3PQ9Y6N3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLCA3PQ9Y6N3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms