Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDHGA9Q9Y5G4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 DUSP5P2-201ENST00000426873 1033 ntBASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDHGA9Q9Y5G4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 C11orf96-202ENST00000528572 1834 ntBASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 AC098590.1-201ENST00000468126 897 ntBASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 RPS2P52-201ENST00000469610 820 ntBASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 AC092053.2-201ENST00000640557 1818 ntBASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHGA9Q9Y5G4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 GCSHP5-201ENST00000443090 522 ntBASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHGA9Q9Y5G4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA9Q9Y5G4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHGA9Q9Y5G4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHGA9Q9Y5G4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms