Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 AC087742.1-201ENST00000575880 1738 ntBASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.04■□□□□ 0.96
SIT1Q9Y3P8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 AC239809.2-201ENST00000415381 517 ntBASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIT1Q9Y3P8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 AC012306.2-201ENST00000609350 630 ntBASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 AC110285.5-201ENST00000611501 352 ntBASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.02■□□□□ 0.96
SIT1Q9Y3P8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.02■□□□□ 0.95
SIT1Q9Y3P8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.02■□□□□ 0.95
SIT1Q9Y3P8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 AL445228.2-201ENST00000605589 952 ntBASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 CYP21A1P-202ENST00000354927 1481 ntBASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.01■□□□□ 0.95
SIT1Q9Y3P8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 AC105020.6-201ENST00000621523 1217 ntBASIC21■□□□□ 0.95
SIT1Q9Y3P8 AC113410.3-201ENST00000623366 203 ntBASIC21■□□□□ 0.95
SIT1Q9Y3P8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
SIT1Q9Y3P8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIT1Q9Y3P8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.99■□□□□ 0.95
SIT1Q9Y3P8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms