Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 AC100791.3-201ENST00000617619 330 ntBASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 ITM2C-210ENST00000620962 501 ntBASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LRIT1Q9P2V4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 KRT17P1-201ENST00000399211 1546 ntBASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LRIT1Q9P2V4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 CYP2T3P-201ENST00000601990 817 ntBASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 EP400NL-214ENST00000641289 2402 ntBASIC20.12■□□□□ 0.81
LRIT1Q9P2V4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 AC007322.3-201ENST00000426526 701 ntBASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 AC008687.6-201ENST00000596318 630 ntBASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LRIT1Q9P2V4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 ESRRAP1-201ENST00000400596 1257 ntBASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LRIT1Q9P2V4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT1Q9P2V4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LRIT1Q9P2V4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms