Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 AL355075.4-201ENST00000554988 638 ntBASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 AC113410.3-201ENST00000623366 203 ntBASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TFCP2L1Q9NZI6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
TFCP2L1Q9NZI6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.58■■□□□ 1.84
TFCP2L1Q9NZI6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 AC239809.2-201ENST00000415381 517 ntBASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
TFCP2L1Q9NZI6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 CD177P1-201ENST00000606252 935 ntBASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TFCP2L1Q9NZI6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 RN7SL850P-201ENST00000579959 291 ntBASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TFCP2L1Q9NZI6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 AC110285.5-201ENST00000611501 352 ntBASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.54■■□□□ 1.84
TFCP2L1Q9NZI6 AC003102.1-202ENST00000563394 1796 ntBASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TFCP2L1Q9NZI6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 PRKY-204ENST00000533551 1019 ntBASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
TFCP2L1Q9NZI6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.51■■□□□ 1.83
TFCP2L1Q9NZI6 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms