Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNIP1Q9NZI2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 AL354811.1-201ENST00000610286 706 ntBASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 AL136967.2-201ENST00000623968 743 ntBASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNIP1Q9NZI2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNIP1Q9NZI2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.39■□□□□ 0.38
KCNIP1Q9NZI2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 AC012414.1-201ENST00000556676 535 ntBASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 AL139246.5-201ENST00000606645 996 ntBASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KCNIP1Q9NZI2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KCNIP1Q9NZI2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KCNIP1Q9NZI2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms