Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC079416.2-201ENST00000625035 1193 ntBASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.66■□□□□ 0.74
PRDM9Q9NQV7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 RARRES2P11-201ENST00000635158 484 ntBASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 AC073111.5-205ENST00000641717 521 ntBASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PRDM9Q9NQV7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PRDM9Q9NQV7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 DUX4L16-201ENST00000555130 1264 ntBASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 AC243732.1-201ENST00000612648 864 ntBASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRDM9Q9NQV7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 CDCA4P2-201ENST00000441182 718 ntBASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 AC245052.3-201ENST00000450182 901 ntBASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 TERF1P5-201ENST00000477545 1207 ntBASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 AC231657.2-201ENST00000624556 255 ntBASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PRDM9Q9NQV7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.62■□□□□ 0.73
PRDM9Q9NQV7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 AC013268.1-206ENST00000638368 961 ntBASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 AC112229.1-201ENST00000639295 961 ntBASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.61■□□□□ 0.73
PRDM9Q9NQV7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.6■□□□□ 0.73
PRDM9Q9NQV7 RBM17P2-201ENST00000616397 1405 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms