Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 AC110285.5-201ENST00000611501 352 ntBASIC19.89■□□□□ 0.77
CNTNAP3Q9BZ76 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AL450487.1-201ENST00000426799 995 ntBASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 RARRES2P10-201ENST00000564312 460 ntBASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC120498.10-201ENST00000621827 505 ntBASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CNTNAP3Q9BZ76 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 AP000593.1-201ENST00000393668 712 ntBASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 DUSP5P1-201ENST00000441325 1139 ntBASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 AL355355.2-201ENST00000442321 338 ntBASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.87■□□□□ 0.77
CNTNAP3Q9BZ76 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 AC073508.3-201ENST00000619697 1419 ntBASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 CRYGFP-201ENST00000418459 633 ntBASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNTNAP3Q9BZ76 KRT8P9-201ENST00000558927 1449 ntBASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 LINC01568-207ENST00000641790 1380 ntBASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 RBM17P2-201ENST00000616397 1405 ntBASIC19.85■□□□□ 0.77
CNTNAP3Q9BZ76 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.84■□□□□ 0.77
CNTNAP3Q9BZ76 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms