Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.97
LRFN3Q9BTN0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
LRFN3Q9BTN0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 AC091799.1-201ENST00000422823 811 ntBASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRFN3Q9BTN0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 AC010947.1-201ENST00000623454 693 ntBASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRFN3Q9BTN0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRFN3Q9BTN0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 AC010203.1-204ENST00000548782 407 ntBASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRFN3Q9BTN0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 AC006538.3-201ENST00000612495 578 ntBASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRFN3Q9BTN0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LRFN3Q9BTN0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LRFN3Q9BTN0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LRFN3Q9BTN0 HTR7P1-201ENST00000538670 1336 ntBASIC21.02■□□□□ 0.95
LRFN3Q9BTN0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 AP000593.1-201ENST00000393668 712 ntBASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 REXO1L10P-201ENST00000615707 1290 ntBASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 AC061975.6-201ENST00000579045 1553 ntBASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LRFN3Q9BTN0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LRFN3Q9BTN0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LRFN3Q9BTN0 AL390955.1-201ENST00000428694 934 ntBASIC21■□□□□ 0.95
LRFN3Q9BTN0 LIN28AP1-201ENST00000429574 405 ntBASIC21■□□□□ 0.95
LRFN3Q9BTN0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21■□□□□ 0.95
LRFN3Q9BTN0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms