Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.7■■□□□ 1.22
CBWD1Q9BRT8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD1Q9BRT8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CBWD1Q9BRT8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.7■■□□□ 1.22
CBWD1Q9BRT8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CBWD1Q9BRT8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 TERF1P5-201ENST00000477545 1207 ntBASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CBWD1Q9BRT8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CBWD1Q9BRT8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 AC091799.1-201ENST00000422823 811 ntBASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 CNN2P6-201ENST00000439038 900 ntBASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CBWD1Q9BRT8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 AC080038.1-201ENST00000611274 1154 ntBASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CBWD1Q9BRT8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.65■■□□□ 1.22
CBWD1Q9BRT8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD1Q9BRT8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD1Q9BRT8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.64■■□□□ 1.22
CBWD1Q9BRT8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD1Q9BRT8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CBWD1Q9BRT8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD1Q9BRT8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD1Q9BRT8 PLK5-205ENST00000642079 1969 ntBASIC22.64■■□□□ 1.21
CBWD1Q9BRT8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CBWD1Q9BRT8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.64■■□□□ 1.21
CBWD1Q9BRT8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms