Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SMR3AQ99954 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.09■□□□□ 0.33
SMR3AQ99954 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMR3AQ99954 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SMR3AQ99954 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMR3AQ99954 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.09■□□□□ 0.33
SMR3AQ99954 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.09■□□□□ 0.33
SMR3AQ99954 AC026471.5-201ENST00000615068 467 ntBASIC17.09■□□□□ 0.33
SMR3AQ99954 MIR6786-201ENST00000616843 113 ntBASIC17.09■□□□□ 0.33
SMR3AQ99954 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.09■□□□□ 0.33
SMR3AQ99954 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.09■□□□□ 0.33
SMR3AQ99954 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SMR3AQ99954 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.09■□□□□ 0.33
SMR3AQ99954 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMR3AQ99954 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMR3AQ99954 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMR3AQ99954 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.08■□□□□ 0.32
SMR3AQ99954 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.08■□□□□ 0.32
SMR3AQ99954 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.08■□□□□ 0.32
SMR3AQ99954 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.08■□□□□ 0.32
SMR3AQ99954 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMR3AQ99954 AP003071.4-201ENST00000562276 1284 ntBASIC17.08■□□□□ 0.32
SMR3AQ99954 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMR3AQ99954 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SMR3AQ99954 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMR3AQ99954 AC005521.1-201ENST00000393351 872 ntBASIC17.07■□□□□ 0.32
SMR3AQ99954 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.07■□□□□ 0.32
SMR3AQ99954 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.07■□□□□ 0.32
SMR3AQ99954 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.07■□□□□ 0.32
SMR3AQ99954 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMR3AQ99954 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SMR3AQ99954 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.06■□□□□ 0.32
SMR3AQ99954 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.06■□□□□ 0.32
SMR3AQ99954 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.06■□□□□ 0.32
SMR3AQ99954 KRT18P57-201ENST00000443599 1254 ntBASIC17.06■□□□□ 0.32
SMR3AQ99954 AC005363.2-201ENST00000618631 242 ntBASIC17.06■□□□□ 0.32
SMR3AQ99954 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMR3AQ99954 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.05■□□□□ 0.32
SMR3AQ99954 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.05■□□□□ 0.32
SMR3AQ99954 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.05■□□□□ 0.32
SMR3AQ99954 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.05■□□□□ 0.32
SMR3AQ99954 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.05■□□□□ 0.32
SMR3AQ99954 RARRES2P10-201ENST00000564312 460 ntBASIC17.05■□□□□ 0.32
SMR3AQ99954 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.05■□□□□ 0.32
SMR3AQ99954 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMR3AQ99954 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.05■□□□□ 0.32
SMR3AQ99954 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
SMR3AQ99954 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.05■□□□□ 0.32
SMR3AQ99954 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.05■□□□□ 0.32
SMR3AQ99954 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 ANOS2P-203ENST00000472227 1816 ntBASIC17.05■□□□□ 0.32
SMR3AQ99954 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMR3AQ99954 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMR3AQ99954 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMR3AQ99954 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMR3AQ99954 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms