Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
NPAS2Q99743 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.27■□□□□ 0.84
NPAS2Q99743 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.27■□□□□ 0.84
NPAS2Q99743 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NPAS2Q99743 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NPAS2Q99743 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NPAS2Q99743 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NPAS2Q99743 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 AC003102.1-202ENST00000563394 1796 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
NPAS2Q99743 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
NPAS2Q99743 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NPAS2Q99743 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L2-201ENST00000561772 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L6-201ENST00000626483 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L1-201ENST00000627662 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L8-201ENST00000629013 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L3-201ENST00000630187 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L7-201ENST00000630678 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 DUX4L5-201ENST00000630834 1275 ntBASIC20.26■□□□□ 0.83
NPAS2Q99743 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
NPAS2Q99743 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.26■□□□□ 0.83
NPAS2Q99743 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NPAS2Q99743 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NPAS2Q99743 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAS2Q99743 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.25■□□□□ 0.83
NPAS2Q99743 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.25■□□□□ 0.83
NPAS2Q99743 AC073314.1-201ENST00000568729 2216 ntBASIC20.25■□□□□ 0.83
NPAS2Q99743 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.25■□□□□ 0.83
NPAS2Q99743 AC123595.1-201ENST00000440769 1046 ntBASIC20.25■□□□□ 0.83
NPAS2Q99743 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.25■□□□□ 0.83
NPAS2Q99743 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.25■□□□□ 0.83
NPAS2Q99743 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.25■□□□□ 0.83
NPAS2Q99743 AC105233.4-201ENST00000642045 216 ntBASIC20.25■□□□□ 0.83
NPAS2Q99743 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 PCDHAC2-203ENST00000615316 3011 ntBASIC20.25■□□□□ 0.83
NPAS2Q99743 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.25■□□□□ 0.83
NPAS2Q99743 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.25■□□□□ 0.83
NPAS2Q99743 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAS2Q99743 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NPAS2Q99743 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAS2Q99743 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAS2Q99743 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NPAS2Q99743 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NPAS2Q99743 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.24■□□□□ 0.83
NPAS2Q99743 AC068587.7-201ENST00000641602 218 ntBASIC20.24■□□□□ 0.83
NPAS2Q99743 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NPAS2Q99743 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 GABARAPL3-202ENST00000624044 1851 ntBASIC20.24■□□□□ 0.83
NPAS2Q99743 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAS2Q99743 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.24■□□□□ 0.83
NPAS2Q99743 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAS2Q99743 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAS2Q99743 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NPAS2Q99743 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
NPAS2Q99743 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
NPAS2Q99743 AP005212.1-201ENST00000581547 1997 ntBASIC20.23■□□□□ 0.83
NPAS2Q99743 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
NPAS2Q99743 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 AC034268.1-201ENST00000441047 882 ntBASIC20.23■□□□□ 0.83
NPAS2Q99743 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.23■□□□□ 0.83
NPAS2Q99743 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.23■□□□□ 0.83
NPAS2Q99743 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAS2Q99743 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAS2Q99743 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms