Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 AC093787.1-201ENST00000450396 207 ntBASIC16.14■□□□□ 0.17
DUX3Q96PT4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
DUX3Q96PT4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DUX3Q96PT4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 KRT16P2-201ENST00000414673 1423 ntBASIC16.13■□□□□ 0.17
DUX3Q96PT4 RBM17P2-201ENST00000616397 1405 ntBASIC16.13■□□□□ 0.17
DUX3Q96PT4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DUX3Q96PT4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.13■□□□□ 0.17
DUX3Q96PT4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 AC008694.1-202ENST00000636953 945 ntBASIC16.12■□□□□ 0.17
DUX3Q96PT4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUX3Q96PT4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 MKRN4P-201ENST00000444706 1521 ntBASIC16.11■□□□□ 0.17
DUX3Q96PT4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 AC142086.2-201ENST00000569753 217 ntBASIC16.11■□□□□ 0.17
DUX3Q96PT4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 AC133552.2-202ENST00000575694 574 ntBASIC16.11■□□□□ 0.17
DUX3Q96PT4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DUX3Q96PT4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUX3Q96PT4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms