Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CASD1Q96PB1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 UNC93B4-201ENST00000505679 747 ntBASIC22.32■■□□□ 1.16
CASD1Q96PB1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.32■■□□□ 1.16
CASD1Q96PB1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CASD1Q96PB1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 AL596275.1-201ENST00000423464 877 ntBASIC22.31■■□□□ 1.16
CASD1Q96PB1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CASD1Q96PB1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.31■■□□□ 1.16
CASD1Q96PB1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 RPS2P4-201ENST00000476944 856 ntBASIC22.3■■□□□ 1.16
CASD1Q96PB1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CASD1Q96PB1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.3■■□□□ 1.16
CASD1Q96PB1 AC092368.3-202ENST00000574180 1591 ntBASIC22.29■■□□□ 1.16
CASD1Q96PB1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 AL359736.2-201ENST00000621992 437 ntBASIC22.29■■□□□ 1.16
CASD1Q96PB1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CASD1Q96PB1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CASD1Q96PB1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASD1Q96PB1 AC116050.2-201ENST00000612102 1779 ntBASIC22.28■■□□□ 1.16
CASD1Q96PB1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASD1Q96PB1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASD1Q96PB1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.28■■□□□ 1.16
CASD1Q96PB1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CASD1Q96PB1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.28■■□□□ 1.16
CASD1Q96PB1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CASD1Q96PB1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms