Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 AC008687.6-201ENST00000596318 630 ntBASIC16.92■□□□□ 0.3
ZNF48Q96MX3 AL591742.1-201ENST00000604433 565 ntBASIC16.92■□□□□ 0.3
ZNF48Q96MX3 AC083880.1-201ENST00000608266 535 ntBASIC16.92■□□□□ 0.3
ZNF48Q96MX3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZNF48Q96MX3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 AC243732.1-201ENST00000612648 864 ntBASIC16.91■□□□□ 0.3
ZNF48Q96MX3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF48Q96MX3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 AC010980.2-201ENST00000587099 1412 ntBASIC16.9■□□□□ 0.3
ZNF48Q96MX3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 RARRES2P4-201ENST00000514074 484 ntBASIC16.9■□□□□ 0.3
ZNF48Q96MX3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 MYC-209ENST00000641252 345 ntBASIC16.9■□□□□ 0.3
ZNF48Q96MX3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
ZNF48Q96MX3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.89■□□□□ 0.3
ZNF48Q96MX3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF48Q96MX3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 RNF165-205ENST00000588679 2904 ntBASIC16.89■□□□□ 0.29
ZNF48Q96MX3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 AL162412.1-201ENST00000567129 965 ntBASIC16.89■□□□□ 0.29
ZNF48Q96MX3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 ITM2C-210ENST00000620962 501 ntBASIC16.89■□□□□ 0.29
ZNF48Q96MX3 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.89■□□□□ 0.29
ZNF48Q96MX3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF48Q96MX3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 AC026471.6-201ENST00000622954 1905 ntBASIC16.88■□□□□ 0.29
ZNF48Q96MX3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF48Q96MX3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF48Q96MX3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms