Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPG11Q96JI7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SPG11Q96JI7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPG11Q96JI7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 AC239809.2-201ENST00000415381 517 ntBASIC17.71■□□□□ 0.43
SPG11Q96JI7 TMPOP1-202ENST00000424642 1267 ntBASIC17.71■□□□□ 0.43
SPG11Q96JI7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.71■□□□□ 0.43
SPG11Q96JI7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPG11Q96JI7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SPG11Q96JI7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SPG11Q96JI7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SPG11Q96JI7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.7■□□□□ 0.42
SPG11Q96JI7 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.7■□□□□ 0.42
SPG11Q96JI7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 KRT18P68-201ENST00000392293 1000 ntBASIC17.69■□□□□ 0.42
SPG11Q96JI7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 AC087499.1-201ENST00000418141 1075 ntBASIC17.69■□□□□ 0.42
SPG11Q96JI7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SPG11Q96JI7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SPG11Q96JI7 AC093323.1-202ENST00000635031 2045 ntBASIC17.68■□□□□ 0.42
SPG11Q96JI7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SPG11Q96JI7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SPG11Q96JI7 ARMC10P1-201ENST00000313754 855 ntBASIC17.68■□□□□ 0.42
SPG11Q96JI7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SPG11Q96JI7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.68■□□□□ 0.42
SPG11Q96JI7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.68■□□□□ 0.42
SPG11Q96JI7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SPG11Q96JI7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms