Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC239809.2-201ENST00000415381 517 ntBASIC22.64■■□□□ 1.21
LRCH3Q96II8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.64■■□□□ 1.21
LRCH3Q96II8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.64■■□□□ 1.21
LRCH3Q96II8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRCH3Q96II8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LRCH3Q96II8 AC243732.1-201ENST00000612648 864 ntBASIC22.64■■□□□ 1.21
LRCH3Q96II8 AC026471.5-201ENST00000615068 467 ntBASIC22.64■■□□□ 1.21
LRCH3Q96II8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRCH3Q96II8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRCH3Q96II8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRCH3Q96II8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRCH3Q96II8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 AP003071.4-201ENST00000562276 1284 ntBASIC22.63■■□□□ 1.21
LRCH3Q96II8 AL589743.5-201ENST00000616611 1050 ntBASIC22.63■■□□□ 1.21
LRCH3Q96II8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
LRCH3Q96II8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRCH3Q96II8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRCH3Q96II8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRCH3Q96II8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.62■■□□□ 1.21
LRCH3Q96II8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 AC110285.5-201ENST00000611501 352 ntBASIC22.61■■□□□ 1.21
LRCH3Q96II8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
LRCH3Q96II8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LRCH3Q96II8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.6■■□□□ 1.21
LRCH3Q96II8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.6■■□□□ 1.21
LRCH3Q96II8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
LRCH3Q96II8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.6■■□□□ 1.21
LRCH3Q96II8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LRCH3Q96II8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 KRT16P2-201ENST00000414673 1423 ntBASIC22.59■■□□□ 1.21
LRCH3Q96II8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC22.59■■□□□ 1.21
LRCH3Q96II8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LRCH3Q96II8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.59■■□□□ 1.21
LRCH3Q96II8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LRCH3Q96II8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRCH3Q96II8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.59■■□□□ 1.21
LRCH3Q96II8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 KRASP1-201ENST00000407852 552 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 AC113347.1-201ENST00000413321 391 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 DUX4L26-201ENST00000489078 1255 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 KRT126P-201ENST00000549467 1181 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 RARRES2P10-201ENST00000564312 460 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.58■■□□□ 1.21
LRCH3Q96II8 AC006557.6-201ENST00000623071 864 ntBASIC22.58■■□□□ 1.21
LRCH3Q96II8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LRCH3Q96II8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms