Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 KRT18P14-201ENST00000534205 1250 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L2-201ENST00000561772 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L6-201ENST00000626483 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L1-201ENST00000627662 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L8-201ENST00000629013 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L3-201ENST00000630187 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L7-201ENST00000630678 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 DUX4L5-201ENST00000630834 1275 ntBASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MS4A3Q96HJ5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 AC055733.4-201ENST00000638462 1354 ntBASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 RN7SL121P-201ENST00000584223 273 ntBASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 AC027348.2-201ENST00000624375 642 ntBASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MS4A3Q96HJ5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 LINC01521-201ENST00000504184 1943 ntBASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 AL356094.1-201ENST00000624663 1212 ntBASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MS4A3Q96HJ5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.57
MS4A3Q96HJ5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 UPF3AP2-201ENST00000457924 1132 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 AL355816.2-201ENST00000610049 647 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 MIR5787-201ENST00000611784 55 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 AC022960.2-201ENST00000616300 666 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 AF106564.1-201ENST00000607058 2553 ntBASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.58■□□□□ 0.56
MS4A3Q96HJ5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 RPS6P14-201ENST00000425165 719 ntBASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 AL117351.1-201ENST00000438864 766 ntBASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 AC034268.1-201ENST00000441047 882 ntBASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.57■□□□□ 0.56
MS4A3Q96HJ5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms