Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 AC005837.3-201ENST00000612163 286 ntBASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 AC006128.1-201ENST00000624704 1661 ntBASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 AP005212.1-201ENST00000581547 1997 ntBASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.44■□□□□ 0.38
RTN4IP1Q8WWV3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 MIR638-201ENST00000385237 100 ntBASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 SMUG1P1-201ENST00000590640 811 ntBASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RTN4IP1Q8WWV3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 AP004607.7-201ENST00000527152 1677 ntBASIC17.42■□□□□ 0.38
RTN4IP1Q8WWV3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 AC073314.1-201ENST00000568729 2216 ntBASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.41■□□□□ 0.38
RTN4IP1Q8WWV3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms