Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SHKBP1Q8TBC3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 AC097658.1-201ENST00000475555 843 ntBASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 AC091874.3-201ENST00000512672 1195 ntBASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 AC008687.6-201ENST00000596318 630 ntBASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 AC010542.4-201ENST00000563151 1910 ntBASIC21.86■■□□□ 1.09
SHKBP1Q8TBC3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SHKBP1Q8TBC3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 AC091799.1-201ENST00000422823 811 ntBASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 ITM2C-210ENST00000620962 501 ntBASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.84■■□□□ 1.09
SHKBP1Q8TBC3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.83■■□□□ 1.09
SHKBP1Q8TBC3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SHKBP1Q8TBC3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
SHKBP1Q8TBC3 C11orf96-202ENST00000528572 1834 ntBASIC21.83■■□□□ 1.08
SHKBP1Q8TBC3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SHKBP1Q8TBC3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SHKBP1Q8TBC3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms