Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 AC211429.1-201ENST00000415277 523 ntBASIC21.37■■□□□ 1.01
PJA1Q8NG27 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 SNORA78-201ENST00000459373 127 ntBASIC21.37■■□□□ 1.01
PJA1Q8NG27 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 Z99916.2-201ENST00000604037 246 ntBASIC21.37■■□□□ 1.01
PJA1Q8NG27 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PJA1Q8NG27 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
PJA1Q8NG27 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 KRT17P3-201ENST00000420566 1262 ntBASIC21.36■■□□□ 1.01
PJA1Q8NG27 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 REXO1L12P-201ENST00000622156 912 ntBASIC21.36■■□□□ 1.01
PJA1Q8NG27 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PJA1Q8NG27 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PJA1Q8NG27 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PJA1Q8NG27 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PJA1Q8NG27 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 AC010331.1-201ENST00000611423 582 ntBASIC21.35■■□□□ 1.01
PJA1Q8NG27 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PJA1Q8NG27 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PJA1Q8NG27 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
PJA1Q8NG27 AC061975.6-201ENST00000579045 1553 ntBASIC21.35■■□□□ 1.01
PJA1Q8NG27 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PJA1Q8NG27 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 PNMA6B-201ENST00000538162 1200 ntBASIC21.34■■□□□ 1.01
PJA1Q8NG27 RN7SL471P-201ENST00000580476 299 ntBASIC21.34■■□□□ 1.01
PJA1Q8NG27 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 FAM21FP-204ENST00000608637 956 ntBASIC21.34■■□□□ 1.01
PJA1Q8NG27 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
PJA1Q8NG27 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PJA1Q8NG27 LINC01023-201ENST00000606054 436 ntBASIC21.33■■□□□ 1.01
PJA1Q8NG27 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 AC100791.3-201ENST00000617619 330 ntBASIC21.33■■□□□ 1.01
PJA1Q8NG27 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PJA1Q8NG27 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.33■■□□□ 1
PJA1Q8NG27 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PJA1Q8NG27 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.32■■□□□ 1
PJA1Q8NG27 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.32■■□□□ 1
PJA1Q8NG27 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.32■■□□□ 1
PJA1Q8NG27 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.32■■□□□ 1
PJA1Q8NG27 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms