Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ZNF248Q8NDW4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 FAM210CP-201ENST00000445714 574 ntBASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF248Q8NDW4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 AC060766.5-201ENST00000590539 871 ntBASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF248Q8NDW4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 RPPH1-201ENST00000516869 333 ntBASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 AL117328.2-201ENST00000624617 1940 ntBASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF248Q8NDW4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 C1QBPP2-201ENST00000528754 825 ntBASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 AC008403.3-201ENST00000598924 454 ntBASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 HLA-B-256ENST00000639848 1089 ntBASIC19.83■□□□□ 0.77
ZNF248Q8NDW4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
ZNF248Q8NDW4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
ZNF248Q8NDW4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF248Q8NDW4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.83■□□□□ 0.76
ZNF248Q8NDW4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF248Q8NDW4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms